RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 DHX16O60231 1041 aaKnown RBP7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 NR1I2O75469 434 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 TRIM37O94972 964 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 YEATS4O95619 227 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 APBA3O96018 575 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 GSDMDP57764 484 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 FOXO4P98177 505 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 FAM160A1Q05DH4 1040 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 SCRN1Q12765 414 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 ADALQ6DHV7 355 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 ZSCAN25Q6NSZ9 544 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 CCDC73Q6ZRK6 1079 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 FERMT3Q86UX7 667 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 LUZP1Q86V48 1076 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 NFATC2IPQ8NCF5 419 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 CCDC191Q8NCU4 936 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 BICD2Q8TD16 824 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 ZNF496Q96IT1 587 aaPredicted RBP7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 TEX13AQ9BXU3 409 aaPredicted RBP7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 TRIM5Q9C035 493 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 NAT10Q9H0A0 1025 aaKnown RBP7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 SIL1Q9H173 461 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 PAG1Q9NWQ8 432 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 TMOD3Q9NYL9 352 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 RTEL1Q9NZ71 1219 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 TFIP11Q9UBB9 837 aaKnown RBP7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 PYCARDQ9ULZ3 195 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 ITGB4P16144 1822 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 NUP98P52948 1817 aa7.17□□□□□ -1.26
UBQLN4-202ENST00000459954 RIOK3O14730 519 aaKnown RBP7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 RNF113AO15541 343 aaKnown RBP7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 MYO1BO43795 1136 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 HSP90B1P14625 803 aaKnown RBP7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 MYL6BP14649 208 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 PTGS1P23219 599 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 CABP4P57796 275 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 PLCB2Q00722 1185 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 TRIM28Q13263 835 aaKnown RBP7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 ATG9AQ7Z3C6 839 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 CCDC186Q7Z3E2 898 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 UBE3BQ7Z3V4 1068 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 BRAPQ7Z569 592 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 ZNF710Q8N1W2 664 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 FLAD1Q8NFF5 587 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 CAMKK2Q96RR4 588 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 DBNDD2Q9BQY9 259 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 GTPBP4Q9BZE4 634 aaKnown RBP7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 BCL2L12Q9HB09 334 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 CWC25Q9NXE8 425 aaPredicted RBP7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 TAOK2Q9UL54 1235 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 USP16Q9Y5T5 823 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 TAF6LQ9Y6J9 622 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 KCPQ6ZWJ8 1503 aa7.16□□□□□ -1.26
UBQLN4-202ENST00000459954 MYH2Q9UKX2 1941 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 PTPDC1A2A3K4 754 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 E7EWF7 191 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 EYA2O00167 538 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 JAK2O60674 1132 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 KINO60870 393 aaKnown RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 CTDNEP1O95476 244 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 HSPD1P10809 573 aaKnown RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 PDIA3P30101 505 aaKnown RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 FAM193AP78312 1265 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 STK3Q13188 491 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 SLC39A6Q13433 755 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 SNW1Q13573 536 aaKnown RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 CAMK4Q16566 473 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 FAM173BQ6P4H8 233 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 LMBR1LQ6UX01 489 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 STOX1Q6ZVD7 989 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 LRRC8AQ8IWT6 810 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 CCAR1Q8IX12 1150 aaKnown RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 DRC7Q8IY82 874 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 CKAP2LQ8IYA6 745 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 ELOA2Q8IYF1 753 aaPredicted RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 CEP57L1Q8IYX8 460 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 SPC24Q8NBT2 197 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 KCNG4Q8TDN1 519 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 ZNF512BQ96KM6 892 aaPredicted RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 TIGD1Q96MW7 591 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 PLA2G12BQ9BX93 195 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 OSBPL5Q9H0X9 879 aaPredicted RBP7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 POLR3EQ9NVU0 708 aa7.15□□□□□ -1.26
UBQLN4-202ENST00000459954 IFIT1P09914 478 aaKnown RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 TNNT1P13805 278 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 HOXD11P31277 338 aaPredicted RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 FGD1P98174 961 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 FMR1NBQ8N0W7 255 aaPredicted RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 CARMIL3Q8ND23 1372 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 KLHDC4Q8TBB5 520 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 MRPS27Q92552 414 aaKnown RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 TCEANC2Q96MN5 208 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 USP28Q96RU2 1077 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 NOL10Q9BSC4 688 aaKnown RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 DNAJC25Q9H1X3 360 aa7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 CGNQ9P2M7 1197 aaKnown RBP7.14□□□□□ -1.27
UBQLN4-202ENST00000459954 WNK3Q9BYP7 1800 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms