RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 JAG2Q9Y219 1238 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 C21orf2O43822 256 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
USP39-210ENST00000459775 UFL1O94874 794 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 SLC5A1P13866 664 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP39-210ENST00000459775 TTC39AQ5SRH9 613 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
USP39-210ENST00000459775 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
USP39-210ENST00000459775 ATP5JP18859 108 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 MCAMP43121 646 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 STYK1Q6J9G0 422 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 FAM84BQ96KN1 310 aaPredicted RBP12.53□□□□□ -0.4
USP39-210ENST00000459775 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 GOLIM4O00461 696 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
USP39-210ENST00000459775 ZAP70P43403 619 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 SP8Q8IXZ3 490 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 ANKRD2Q9GZV1 360 aa12.53□□□□□ -0.4
USP39-210ENST00000459775 XDHP47989 1333 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 ERC2O15083 957 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 ANAPC15P60006 121 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 UBE4AQ14139 1066 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 SMC1BQ8NDV3 1235 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 TBC1D16Q8TBP0 767 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 BACH2Q9BYV9 841 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 IL25Q9H293 177 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.4
USP39-210ENST00000459775 SLX4Q8IY92 1834 aa12.52□□□□□ -0.41
USP39-210ENST00000459775 RASGRF1Q13972 1273 aa12.52□□□□□ -0.41
USP39-210ENST00000459775 AOX1Q06278 1338 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 FAM43BQ6ZT52 329 aaPredicted RBP12.51□□□□□ -0.41
USP39-210ENST00000459775 TTLL6Q8N841 843 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
USP39-210ENST00000459775 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 HAUS7Q99871 368 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 GGA1Q9UJY5 639 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
USP39-210ENST00000459775 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
USP39-210ENST00000459775 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
USP39-210ENST00000459775 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
USP39-210ENST00000459775 MPNDQ8N594 471 aa12.5□□□□□ -0.41
USP39-210ENST00000459775 CACNA1SQ13698 1873 aa12.5□□□□□ -0.41
USP39-210ENST00000459775 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
USP39-210ENST00000459775 RBM25P49756 843 aaKnown RBP12.5□□□□□ -0.41
USP39-210ENST00000459775 VPS37DQ86XT2 251 aa12.5□□□□□ -0.41
USP39-210ENST00000459775 A0A1B0GUL6 1792 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 FBXO33Q7Z6M2 555 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 PIH1D3Q9NQM4 214 aaKnown RBP12.49□□□□□ -0.41
USP39-210ENST00000459775 PAG1Q9NWQ8 432 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 COL1A1P02452 1464 aaPredicted RBP12.49□□□□□ -0.41
USP39-210ENST00000459775 ARID4AP29374 1257 aaPredicted RBP12.49□□□□□ -0.41
USP39-210ENST00000459775 HIBADHP31937 336 aaKnown RBP12.49□□□□□ -0.41
USP39-210ENST00000459775 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
USP39-210ENST00000459775 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 SPATA5Q8NB90 893 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
USP39-210ENST00000459775 CDC45O75419 566 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 ATP2B4P23634 1241 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 CHMLP26374 656 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 CAVIN4Q5BKX8 364 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 CWC27Q6UX04 472 aaKnown RBP12.48□□□□□ -0.41
USP39-210ENST00000459775 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 SEC62Q99442 399 aaKnown RBP12.48□□□□□ -0.41
USP39-210ENST00000459775 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
USP39-210ENST00000459775 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
USP39-210ENST00000459775 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
USP39-210ENST00000459775 DALRD3Q5D0E6 543 aaKnown RBP12.47□□□□□ -0.41
USP39-210ENST00000459775 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
USP39-210ENST00000459775 CEP350Q5VT06 3117 aa12.47□□□□□ -0.41
USP39-210ENST00000459775 TMC4Q7Z404 712 aa12.47□□□□□ -0.41
USP39-210ENST00000459775 GRIK5Q16478 980 aa12.46□□□□□ -0.41
USP39-210ENST00000459775 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
USP39-210ENST00000459775 DBNDD1Q9H9R9 158 aa12.46□□□□□ -0.41
USP39-210ENST00000459775 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.41
USP39-210ENST00000459775 A0A0D9SFI3 127 aa12.46□□□□□ -0.42
USP39-210ENST00000459775 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.42
USP39-210ENST00000459775 IDH1O75874 414 aaKnown RBP12.46□□□□□ -0.42
USP39-210ENST00000459775 UQCRFS1P1P0C7P4 283 aa12.46□□□□□ -0.42
USP39-210ENST00000459775 NMIQ13287 307 aaPredicted RBP12.46□□□□□ -0.42
USP39-210ENST00000459775 AOC3Q16853 763 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms