RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CAPNS2Q96L46 248 aa20.13■□□□□ 0.81
COL7A1-203ENST00000459756 FBXO3Q9UK99 471 aa20.13■□□□□ 0.81
COL7A1-203ENST00000459756 FAM205AQ6ZU69 1335 aa20.12■□□□□ 0.81
COL7A1-203ENST00000459756 WNT10BO00744 389 aa20.12■□□□□ 0.81
COL7A1-203ENST00000459756 PUM3Q15397 648 aaKnown RBP20.12■□□□□ 0.81
COL7A1-203ENST00000459756 ZKSCAN2Q63HK3 967 aa20.12■□□□□ 0.81
COL7A1-203ENST00000459756 FBXO33Q7Z6M2 555 aa20.12■□□□□ 0.81
COL7A1-203ENST00000459756 VPS37DQ86XT2 251 aa20.12■□□□□ 0.81
COL7A1-203ENST00000459756 CIAO1O76071 339 aa20.11■□□□□ 0.81
COL7A1-203ENST00000459756 CAVIN4Q5BKX8 364 aa20.11■□□□□ 0.81
COL7A1-203ENST00000459756 CDCA5Q96FF9 252 aa20.11■□□□□ 0.81
COL7A1-203ENST00000459756 IFIT1P09914 478 aaKnown RBP20.1■□□□□ 0.81
COL7A1-203ENST00000459756 CYP4F22Q6NT55 531 aa20.1■□□□□ 0.81
COL7A1-203ENST00000459756 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
COL7A1-203ENST00000459756 C2orf69Q8N8R5 385 aa20.1■□□□□ 0.81
COL7A1-203ENST00000459756 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
COL7A1-203ENST00000459756 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
COL7A1-203ENST00000459756 GBA2Q9HCG7 927 aaPredicted RBP20.1■□□□□ 0.81
COL7A1-203ENST00000459756 THSD7BQ9C0I4 1608 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 FGFR2P21802 821 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 HUNKP57058 714 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 DLGAP5Q15398 846 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 MTMR14Q8NCE2 650 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 TNNQ9UQP3 1299 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 JAG2Q9Y219 1238 aa20.09■□□□□ 0.81
COL7A1-203ENST00000459756 F8W031 263 aaPredicted RBP20.08■□□□□ 0.81
COL7A1-203ENST00000459756 MAP2K1Q02750 393 aaPredicted RBP20.08■□□□□ 0.81
COL7A1-203ENST00000459756 GRM1Q13255 1194 aa20.08■□□□□ 0.81
COL7A1-203ENST00000459756 MTX1Q13505 466 aa20.08■□□□□ 0.81
COL7A1-203ENST00000459756 MFSD14BQ5SR56 506 aa20.08■□□□□ 0.81
COL7A1-203ENST00000459756 LPIN2Q92539 896 aa20.08■□□□□ 0.81
COL7A1-203ENST00000459756 SIL1Q9H173 461 aa20.08■□□□□ 0.81
COL7A1-203ENST00000459756 COPRSQ9NQ92 184 aa20.08■□□□□ 0.81
COL7A1-203ENST00000459756 SLC5A1P13866 664 aa20.07■□□□□ 0.8
COL7A1-203ENST00000459756 IL15P40933 162 aaPredicted RBP20.07■□□□□ 0.8
COL7A1-203ENST00000459756 APOBEC3FQ8IUX4 373 aaKnown RBP20.07■□□□□ 0.8
COL7A1-203ENST00000459756 AIDAQ96BJ3 306 aa20.07■□□□□ 0.8
COL7A1-203ENST00000459756 WBP1LQ9NX94 342 aa20.07■□□□□ 0.8
COL7A1-203ENST00000459756 CEP126Q9P2H0 1117 aa20.07■□□□□ 0.8
COL7A1-203ENST00000459756 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
COL7A1-203ENST00000459756 GNAI2P04899 355 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 MAP2K2P36507 400 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 BCAMP50895 628 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 FKBP1BP68106 108 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 ARAP2Q8WZ64 1704 aa20.06■□□□□ 0.8
COL7A1-203ENST00000459756 MYO1BO43795 1136 aa20.05■□□□□ 0.8
COL7A1-203ENST00000459756 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
COL7A1-203ENST00000459756 FTSJ3Q8IY81 847 aaKnown RBP20.05■□□□□ 0.8
COL7A1-203ENST00000459756 TBC1D22AQ8WUA7 517 aa20.05■□□□□ 0.8
COL7A1-203ENST00000459756 SCAF8Q9UPN6 1271 aaKnown RBP20.05■□□□□ 0.8
COL7A1-203ENST00000459756 IQSEC3Q9UPP2 1182 aaPredicted RBP20.05■□□□□ 0.8
COL7A1-203ENST00000459756 PA2G4Q9UQ80 394 aaKnown RBP20.05■□□□□ 0.8
COL7A1-203ENST00000459756 ECM29Q5VYK3 1845 aa20.04■□□□□ 0.8
COL7A1-203ENST00000459756 SPDYE2BA6NHP3 402 aa20.04■□□□□ 0.8
COL7A1-203ENST00000459756 SPDYE6P0CI01 402 aa20.04■□□□□ 0.8
COL7A1-203ENST00000459756 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
COL7A1-203ENST00000459756 SERPINA10Q9UK55 444 aa20.04■□□□□ 0.8
COL7A1-203ENST00000459756 TTF2Q9UNY4 1162 aaKnown RBP20.04■□□□□ 0.8
COL7A1-203ENST00000459756 PAPPA2Q9BXP8 1791 aa20.03■□□□□ 0.8
COL7A1-203ENST00000459756 FOXN1O15353 648 aa20.03■□□□□ 0.8
COL7A1-203ENST00000459756 AOC2O75106 756 aa20.03■□□□□ 0.8
COL7A1-203ENST00000459756 RBM5P52756 815 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL7A1-203ENST00000459756 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
COL7A1-203ENST00000459756 NOGQ13253 232 aa20.03■□□□□ 0.8
COL7A1-203ENST00000459756 RGMBQ6NW40 437 aa20.03■□□□□ 0.8
COL7A1-203ENST00000459756 DZIP1LQ8IYY4 767 aaKnown RBP20.03■□□□□ 0.8
COL7A1-203ENST00000459756 COL1A1P02452 1464 aaPredicted RBP20.03■□□□□ 0.8
COL7A1-203ENST00000459756 NF2P35240 595 aa20.02■□□□□ 0.8
COL7A1-203ENST00000459756 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-203ENST00000459756 CCDC102AQ96A19 550 aa20.02■□□□□ 0.8
COL7A1-203ENST00000459756 PRMT6Q96LA8 375 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-203ENST00000459756 ZNF157P51786 506 aaPredicted RBP20.01■□□□□ 0.79
COL7A1-203ENST00000459756 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
COL7A1-203ENST00000459756 PRAMEF18Q5VWM3 479 aa20.01■□□□□ 0.79
COL7A1-203ENST00000459756 BEGAINQ9BUH8 593 aa20.01■□□□□ 0.79
COL7A1-203ENST00000459756 PCDHAC2Q9Y5I4 1007 aa20.01■□□□□ 0.79
COL7A1-203ENST00000459756 HDLBPQ00341 1268 aaKnown RBP20■□□□□ 0.79
COL7A1-203ENST00000459756 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
COL7A1-203ENST00000459756 GNL3LQ9NVN8 582 aaKnown RBP20■□□□□ 0.79
COL7A1-203ENST00000459756 SUGT1Q9Y2Z0 365 aa20■□□□□ 0.79
COL7A1-203ENST00000459756 PPP2R3BQ9Y5P8 575 aa20■□□□□ 0.79
COL7A1-203ENST00000459756 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
COL7A1-203ENST00000459756 CLRN2A0PK11 232 aa19.99■□□□□ 0.79
COL7A1-203ENST00000459756 FAM155AB1AL88 458 aaPredicted RBP19.99■□□□□ 0.79
COL7A1-203ENST00000459756 RLBP1P12271 317 aa19.99■□□□□ 0.79
COL7A1-203ENST00000459756 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
COL7A1-203ENST00000459756 WDR66Q8TBY9 1149 aa19.99■□□□□ 0.79
COL7A1-203ENST00000459756 CRKP46108 304 aa19.98■□□□□ 0.79
COL7A1-203ENST00000459756 TTLL12Q14166 644 aaPredicted RBP19.98■□□□□ 0.79
COL7A1-203ENST00000459756 GRIK5Q16478 980 aa19.98■□□□□ 0.79
COL7A1-203ENST00000459756 VEZTQ9HBM0 779 aa19.98■□□□□ 0.79
COL7A1-203ENST00000459756 PRDM10Q9NQV6 1147 aa19.98■□□□□ 0.79
COL7A1-203ENST00000459756 AKAP2Q9Y2D5 859 aa19.98■□□□□ 0.79
COL7A1-203ENST00000459756 MAST3O60307 1309 aa19.98■□□□□ 0.79
COL7A1-203ENST00000459756 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 SEMA3EO15041 775 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 CA12O43570 354 aa19.97■□□□□ 0.79
COL7A1-203ENST00000459756 SLC10A3P09131 477 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms