RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 DNAJC25Q9H1X3 360 aa6.72□□□□□ -1.33
SSX2IP-204ENST00000459708 LINC01387J3KSC0 135 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 IREB2P48200 963 aaKnown RBP6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 PI16Q6UXB8 463 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 FBXO11Q86XK2 927 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 ZSCAN29Q8IWY8 852 aaPredicted RBP6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 SETDB2Q96T68 719 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 TCF12Q99081 682 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 CARD10Q9BWT7 1032 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 ADAM19Q9H013 955 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 SOX13Q9UN79 622 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 PPME1Q9Y570 386 aa6.71□□□□□ -1.34
SSX2IP-204ENST00000459708 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 P4HBP07237 508 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 NOS3P29474 1203 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 MAPK8P45983 427 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 ENOX2Q16206 610 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 CCNJLQ8IV13 435 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 CACTIN-AS1Q8N1I8 211 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 GALNT11Q8NCW6 608 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 ASAP3Q8TDY4 903 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 MEGF10Q96KG7 1140 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
SSX2IP-204ENST00000459708 H3BRJ5 948 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 DLL1O00548 723 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 TM4SF5O14894 197 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 GRIA4P48058 902 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 VN1R5Q7Z5H4 357 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 MUC3BQ9H195 1237 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 PCMTD2Q9NV79 361 aa6.69□□□□□ -1.34
SSX2IP-204ENST00000459708 PLCB3Q01970 1234 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 SPRED3Q2MJR0 410 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 KIAA0319Q5VV43 1072 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 HGSNATQ68CP4 663 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 DNAJC14Q6Y2X3 702 aaPredicted RBP6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 BSNDQ8WZ55 320 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 EHD4Q9H223 541 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 SRA1Q9HD15 236 aaKnown RBP6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 ABCB6Q9NP58 842 aa6.68□□□□□ -1.34
SSX2IP-204ENST00000459708 FAM177BA6PVY3 158 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 FSCN2O14926 492 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 GADD45BO75293 160 aaPredicted RBP6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 CABP4P57796 275 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 GRM2Q14416 872 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 PRR23CQ6ZRP0 262 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 MAP4K3Q8IVH8 894 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
SSX2IP-204ENST00000459708 ANKRD33BA6NCL7 494 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 ADAM11O75078 769 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 WISP1O95388 367 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 PIP4K2BP78356 416 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 PRPF40BQ6NWY9 871 aaKnown RBP6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 FOXD4L4Q8WXT5 416 aaPredicted RBP6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 SLC7A3Q8WY07 619 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 KCNK4Q9NYG8 393 aa6.66□□□□□ -1.34
SSX2IP-204ENST00000459708 A0A096LPE4 126 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 A0A1W2PPZ6 126 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 DDX3YO15523 660 aaKnown RBP6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 PAX4O43316 350 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 SSTR4P31391 388 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 IKBKEQ14164 716 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 CCDC27Q2M243 656 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 FAM117BQ6P1L5 589 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 NPAS4Q8IUM7 802 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 KLHDC7BQ96G42 594 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 SEC31BQ9NQW1 1179 aa6.65□□□□□ -1.34
SSX2IP-204ENST00000459708 LDHBP07195 334 aaKnown RBP6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 ESRRAP11474 423 aaPredicted RBP6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 FSTP19883 344 aa6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 CD68P34810 354 aaPredicted RBP6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 NLRP2Q9NX02 1062 aa6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 COL17A1Q9UMD9 1497 aaPredicted RBP6.64□□□□□ -1.35
SSX2IP-204ENST00000459708 SOX1O00570 391 aaPredicted RBP6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 ITPKAP23677 461 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 NLRP12P59046 1061 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 ATP2B2Q01814 1243 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 PCDH1Q08174 1060 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 KLHL23Q8NBE8 558 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 WNT8BQ93098 351 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 CLEC4MQ9H2X3 399 aaPredicted RBP6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 TRAK1Q9UPV9 953 aa6.63□□□□□ -1.35
SSX2IP-204ENST00000459708 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 ZBTB7CA1YPR0 619 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 TXKP42681 527 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 FCGRTP55899 365 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 C19orf57Q0VDD7 668 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 ZNF423Q2M1K9 1284 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 NXPE4Q6UWF7 544 aa6.62□□□□□ -1.35
SSX2IP-204ENST00000459708 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms