RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	ADARB2	Q9NS39	739 aa	Known RBP	31.8	■■■□□ 2.68
SEMA3C-205	ENST00000458729	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.8	■■■□□ 2.68
SEMA3C-205	ENST00000458729	GORAB	Q5T7V8	394 aa		31.79	■■■□□ 2.68
SEMA3C-205	ENST00000458729	DCTPP1	Q9H773	170 aa		31.79	■■■□□ 2.68
SEMA3C-205	ENST00000458729	ARAP2	Q8WZ64	1704 aa		31.79	■■■□□ 2.68
SEMA3C-205	ENST00000458729	SEMA3E	O15041	775 aa		31.78	■■■□□ 2.68
SEMA3C-205	ENST00000458729	TOMM70	O94826	608 aa		31.78	■■■□□ 2.68
SEMA3C-205	ENST00000458729	PHKA1	P46020	1223 aa		31.78	■■■□□ 2.68
SEMA3C-205	ENST00000458729	MMP14	P50281	582 aa		31.78	■■■□□ 2.68
SEMA3C-205	ENST00000458729	USP17L8	P0C7I0	530 aa		31.77	■■■□□ 2.68
SEMA3C-205	ENST00000458729	USP50	Q70EL3	339 aa	Predicted RBP	31.77	■■■□□ 2.68
SEMA3C-205	ENST00000458729	MXD3	Q9BW11	206 aa		31.77	■■■□□ 2.68
SEMA3C-205	ENST00000458729	APBB1	O00213	710 aa		31.76	■■■□□ 2.68
SEMA3C-205	ENST00000458729	CENPB	P07199	599 aa	Predicted RBP	31.76	■■■□□ 2.68
SEMA3C-205	ENST00000458729	TBC1D22A	Q8WUA7	517 aa		31.76	■■■□□ 2.68
SEMA3C-205	ENST00000458729	IRX6	P78412	446 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	CHAF1A	Q13111	956 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	EAPP	Q56P03	285 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	CLASRP	Q8N2M8	674 aa	Known RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	OGFOD1	Q8N543	542 aa		31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	EAF2	Q96CJ1	260 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	DENND2A	Q9ULE3	1009 aa		31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	JAG2	Q9Y219	1238 aa		31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	ZNF646	O15015	1829 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	ZNF280A	P59817	542 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	HDAC1	Q13547	482 aa	Predicted RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	MFSD14B	Q5SR56	506 aa		31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	CERS5	Q8N5B7	392 aa		31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	RBM46	Q8TBY0	533 aa	Known RBP	31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	IL1RAPL2	Q9NP60	686 aa		31.75	■■■□□ 2.67
SEMA3C-205	ENST00000458729	CCDC158	Q5M9N0	1113 aa		31.74	■■■□□ 2.67
SEMA3C-205	ENST00000458729	WDR66	Q8TBY9	1149 aa		31.74	■■■□□ 2.67
SEMA3C-205	ENST00000458729	DBNDD2	Q9BQY9	259 aa		31.74	■■■□□ 2.67
SEMA3C-205	ENST00000458729	LRRCC1	Q9C099	1032 aa		31.74	■■■□□ 2.67
SEMA3C-205	ENST00000458729	HDAC9	Q9UKV0	1011 aa		31.74	■■■□□ 2.67
SEMA3C-205	ENST00000458729	SHTN1	A0MZ66	631 aa		31.73	■■■□□ 2.67
SEMA3C-205	ENST00000458729	AACS	Q86V21	672 aa		31.73	■■■□□ 2.67
SEMA3C-205	ENST00000458729	LDHD	Q86WU2	507 aa		31.73	■■■□□ 2.67
SEMA3C-205	ENST00000458729	UQCRFS1P1	P0C7P4	283 aa		31.72	■■■□□ 2.67
SEMA3C-205	ENST00000458729	KIAA0825	Q8IV33	1275 aa		31.72	■■■□□ 2.67
SEMA3C-205	ENST00000458729	CCDC8	Q9H0W5	538 aa	Predicted RBP	31.72	■■■□□ 2.67
SEMA3C-205	ENST00000458729	DBNL	Q9UJU6	430 aa	Known RBP	31.71	■■■□□ 2.67
SEMA3C-205	ENST00000458729	PDS5A	Q29RF7	1337 aa	Known RBP	31.7	■■■□□ 2.67
SEMA3C-205	ENST00000458729	ARID4A	P29374	1257 aa	Predicted RBP	31.7	■■■□□ 2.66
SEMA3C-205	ENST00000458729	SAMD7	Q7Z3H4	446 aa		31.7	■■■□□ 2.66
SEMA3C-205	ENST00000458729	SMC1B	Q8NDV3	1235 aa		31.7	■■■□□ 2.66
SEMA3C-205	ENST00000458729	RWDD1	Q9H446	243 aa	Predicted RBP	31.7	■■■□□ 2.66
SEMA3C-205	ENST00000458729	CLEC11A	Q9Y240	323 aa		31.7	■■■□□ 2.66
SEMA3C-205	ENST00000458729	RASGRF1	Q13972	1273 aa		31.69	■■■□□ 2.66
SEMA3C-205	ENST00000458729	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.69	■■■□□ 2.66
SEMA3C-205	ENST00000458729	TTC39A	Q5SRH9	613 aa		31.69	■■■□□ 2.66
SEMA3C-205	ENST00000458729	TRPM4	Q8TD43	1214 aa		31.69	■■■□□ 2.66
SEMA3C-205	ENST00000458729	MYOZ2	Q9NPC6	264 aa		31.69	■■■□□ 2.66
SEMA3C-205	ENST00000458729	SUGT1	Q9Y2Z0	365 aa		31.69	■■■□□ 2.66
SEMA3C-205	ENST00000458729	IFIT2	P09913	472 aa	Known RBP	31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	POTEI	P0CG38	1075 aa		31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	POTEJ	P0CG39	1038 aa		31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	KIF4B	Q2VIQ3	1234 aa		31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	RBM26	Q5T8P6	1007 aa	Known RBP	31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	CHADL	Q6NUI6	762 aa		31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.68	■■■□□ 2.66
SEMA3C-205	ENST00000458729	MYH13	Q9UKX3	1938 aa		31.67	■■■□□ 2.66
SEMA3C-205	ENST00000458729	HIRA	P54198	1017 aa	Predicted RBP	31.67	■■■□□ 2.66
SEMA3C-205	ENST00000458729	FSTL1	Q12841	308 aa		31.67	■■■□□ 2.66
SEMA3C-205	ENST00000458729	ZC3H15	Q8WU90	426 aa	Known RBP	31.67	■■■□□ 2.66
SEMA3C-205	ENST00000458729	GCC1	Q96CN9	775 aa		31.67	■■■□□ 2.66
SEMA3C-205	ENST00000458729	TLR7	Q9NYK1	1049 aa	Known RBP	31.67	■■■□□ 2.66
SEMA3C-205	ENST00000458729		F8W031	263 aa	Predicted RBP	31.66	■■■□□ 2.66
SEMA3C-205	ENST00000458729	SALL1	Q9NSC2	1324 aa		31.66	■■■□□ 2.66
SEMA3C-205	ENST00000458729	COL1A1	P02452	1464 aa	Predicted RBP	31.66	■■■□□ 2.66
SEMA3C-205	ENST00000458729	ZGPAT	Q8N5A5	531 aa	Known RBP	31.65	■■■□□ 2.66
SEMA3C-205	ENST00000458729	SPATA5	Q8NB90	893 aa		31.65	■■■□□ 2.66
SEMA3C-205	ENST00000458729	HMG20B	Q9P0W2	317 aa		31.65	■■■□□ 2.66
SEMA3C-205	ENST00000458729	TTF2	Q9UNY4	1162 aa	Known RBP	31.65	■■■□□ 2.66
SEMA3C-205	ENST00000458729	EGFR	P00533	1210 aa		31.64	■■■□□ 2.66
SEMA3C-205	ENST00000458729	PGAP2	Q9UHJ9	254 aa		31.64	■■■□□ 2.66
SEMA3C-205	ENST00000458729	ADAMTSL1	Q8N6G6	1762 aa		31.64	■■■□□ 2.66
SEMA3C-205	ENST00000458729	BCL11A	Q9H165	835 aa		31.63	■■■□□ 2.65
SEMA3C-205	ENST00000458729	MAST3	O60307	1309 aa		31.62	■■■□□ 2.65
SEMA3C-205	ENST00000458729	SMARCA5	O60264	1052 aa	Predicted RBP	31.62	■■■□□ 2.65
SEMA3C-205	ENST00000458729	MCAM	P43121	646 aa		31.62	■■■□□ 2.65
SEMA3C-205	ENST00000458729	C1QTNF8	P60827	252 aa		31.61	■■■□□ 2.65
SEMA3C-205	ENST00000458729	HDLBP	Q00341	1268 aa	Known RBP	31.61	■■■□□ 2.65
SEMA3C-205	ENST00000458729	MTMR14	Q8NCE2	650 aa		31.61	■■■□□ 2.65
SEMA3C-205	ENST00000458729	MRI	Q9BWK5	157 aa		31.61	■■■□□ 2.65
SEMA3C-205	ENST00000458729	SERPINA10	Q9UK55	444 aa		31.61	■■■□□ 2.65
SEMA3C-205	ENST00000458729	SCARF1	Q14162	830 aa		31.6	■■■□□ 2.65
SEMA3C-205	ENST00000458729	DLGAP5	Q15398	846 aa		31.6	■■■□□ 2.65
SEMA3C-205	ENST00000458729	GRIK5	Q16478	980 aa		31.6	■■■□□ 2.65
SEMA3C-205	ENST00000458729	SPTY2D1	Q68D10	685 aa	Predicted RBP	31.6	■■■□□ 2.65
SEMA3C-205	ENST00000458729	ZBTB47	Q9UFB7	747 aa	Predicted RBP	31.6	■■■□□ 2.65
SEMA3C-205	ENST00000458729	LDHB	P07195	334 aa	Known RBP	31.59	■■■□□ 2.65
SEMA3C-205	ENST00000458729	WNT10B	O00744	389 aa		31.58	■■■□□ 2.65
SEMA3C-205	ENST00000458729	CFAP100	Q494V2	611 aa		31.58	■■■□□ 2.65
SEMA3C-205	ENST00000458729	MAP1S	Q66K74	1059 aa	Predicted RBP	31.58	■■■□□ 2.65
SEMA3C-205	ENST00000458729	ABCF2	Q9UG63	623 aa		31.58	■■■□□ 2.65
SEMA3C-205	ENST00000458729	IGHD	P01880	384 aa		31.57	■■■□□ 2.64
SEMA3C-205	ENST00000458729	RBM5	P52756	815 aa	Known RBP eCLIP	31.57	■■■□□ 2.64
SEMA3C-205	ENST00000458729	PI16	Q6UXB8	463 aa		31.57	■■■□□ 2.64
SEMA3C-205	ENST00000458729	CNTROB	Q8N137	903 aa		31.57	■■■□□ 2.64

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