RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
DDX39B-214ENST00000458640 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 UBXN4Q92575 508 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 METTL22Q9BUU2 404 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-214ENST00000458640 BCL9LQ86UU0 1499 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 GRM8O00222 908 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 STARD3NLO95772 234 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 NBPF7P0C2Y1 421 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 ERCC6LQ2NKX8 1250 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 TMED8Q6PL24 325 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.32e-17■□□□□ 9.5
DDX39B-214ENST00000458640 UTYO14607 1347 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 CCP110O43303 1012 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 IRX1P78414 480 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 LRMPQ12912 555 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 CACTINQ8WUQ7 758 aaKnown RBP13.17□□□□□ -0.3
DDX39B-214ENST00000458640 FAM210AQ96ND0 272 aa13.17□□□□□ -0.3
DDX39B-214ENST00000458640 EFCAB8A8MWE9 144 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 SMC2O95347 1197 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
DDX39B-214ENST00000458640 NBPF5PQ86XG9 351 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-214ENST00000458640 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 TRIM5Q9C035 493 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
DDX39B-214ENST00000458640 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
DDX39B-214ENST00000458640 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
DDX39B-214ENST00000458640 GSDMDP57764 484 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 MTX1Q13505 466 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 TADA2BQ86TJ2 420 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 MYD88Q99836 296 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 IRF6O14896 467 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 ERC2O15083 957 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 GSPT1P15170 499 aaKnown RBP13.15□□□□□ -0.3
DDX39B-214ENST00000458640 LMAN1P49257 510 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 MEX3CQ5U5Q3 659 aaKnown RBP13.15□□□□□ -0.3
DDX39B-214ENST00000458640 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
DDX39B-214ENST00000458640 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.31
DDX39B-214ENST00000458640 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 SMARCA5O60264 1052 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-214ENST00000458640 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-214ENST00000458640 POLA2Q14181 598 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 NBPF14Q5TI25 921 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 FAM43BQ6ZT52 329 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-214ENST00000458640 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 GPR161Q8N6U8 529 aaKnown RBP13.14□□□□□ -0.31
DDX39B-214ENST00000458640 ITFG2Q969R8 447 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX39B-214ENST00000458640 USP21Q9UK80 565 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 TJP1Q07157 1748 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
DDX39B-214ENST00000458640 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 IGKV5-2P06315 115 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 NEK4P51957 841 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 GCKRQ14397 625 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 ANKRD33BA6NCL7 494 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 H0YHG0 523 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 APBB1O00213 710 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 A1BGP04217 495 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-214ENST00000458640 SKILP12757 684 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
DDX39B-214ENST00000458640 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
DDX39B-214ENST00000458640 E2F4Q16254 413 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
DDX39B-214ENST00000458640 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-214ENST00000458640 ARFGAP3Q9NP61 516 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 THSD7AQ9UPZ6 1657 aa13.13□□□□□ -0.31
DDX39B-214ENST00000458640 COL15A1P39059 1388 aa13.12□□□□□ -0.31
DDX39B-214ENST00000458640 NRDCO43847 1150 aa13.12□□□□□ -0.31
DDX39B-214ENST00000458640 TYRO3Q06418 890 aa13.12□□□□□ -0.31
DDX39B-214ENST00000458640 MAP9Q49MG5 647 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms