RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 PRC1O43663 620 aa16.52■□□□□ 0.24
SCFD1-203ENST00000458591 DPCR1Q3MIW9 517 aa16.52■□□□□ 0.24
SCFD1-203ENST00000458591 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
SCFD1-203ENST00000458591 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
SCFD1-203ENST00000458591 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCFD1-203ENST00000458591 V9GYY5 206 aaPredicted RBP16.52■□□□□ 0.24
SCFD1-203ENST00000458591 GLI3P10071 1580 aa16.52■□□□□ 0.24
SCFD1-203ENST00000458591 CCDC69A6NI79 296 aa16.52■□□□□ 0.23
SCFD1-203ENST00000458591 GPR108Q9NPR9 543 aa16.52■□□□□ 0.23
SCFD1-203ENST00000458591 LMTK3Q96Q04 1460 aa16.52■□□□□ 0.23
SCFD1-203ENST00000458591 GOLGA8BA8MQT2 603 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 IGSF3O75054 1194 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 SKILP12757 684 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 LINC00301Q8NCQ3 95 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 CCZ1BP86790 482 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
SCFD1-203ENST00000458591 SARM1Q6SZW1 724 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 NBPF11Q86T75 865 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
SCFD1-203ENST00000458591 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 CDC25BP30305 580 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 STK38Q15208 465 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
SCFD1-203ENST00000458591 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
SCFD1-203ENST00000458591 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 ORC3Q9UBD5 711 aaPredicted RBP16.5■□□□□ 0.23
SCFD1-203ENST00000458591 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 MST1RQ04912 1400 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 CTAGE5O15320 804 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 MARCKSP29966 332 aaPredicted RBP16.5■□□□□ 0.23
SCFD1-203ENST00000458591 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
SCFD1-203ENST00000458591 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 MRFAP1L1Q96HT8 127 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 ANO10Q9NW15 660 aa16.5■□□□□ 0.23
SCFD1-203ENST00000458591 ZHX1Q9UKY1 873 aaPredicted RBP16.5■□□□□ 0.23
SCFD1-203ENST00000458591 NEDD4P46934 1319 aa16.49■□□□□ 0.23
SCFD1-203ENST00000458591 COL18A1P39060 1754 aa16.49■□□□□ 0.23
SCFD1-203ENST00000458591 SMTNL1A8MU46 457 aa16.49■□□□□ 0.23
SCFD1-203ENST00000458591 ZSCAN20P17040 1043 aaPredicted RBP16.49■□□□□ 0.23
SCFD1-203ENST00000458591 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
SCFD1-203ENST00000458591 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
SCFD1-203ENST00000458591 RTEL1Q9NZ71 1219 aa16.49■□□□□ 0.23
SCFD1-203ENST00000458591 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
SCFD1-203ENST00000458591 WDHD1O75717 1129 aaPredicted RBP16.48■□□□□ 0.23
SCFD1-203ENST00000458591 GPTP24298 496 aa16.48■□□□□ 0.23
SCFD1-203ENST00000458591 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
SCFD1-203ENST00000458591 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
SCFD1-203ENST00000458591 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
SCFD1-203ENST00000458591 GPAA1O43292 621 aa16.48■□□□□ 0.23
SCFD1-203ENST00000458591 CEP57L1Q8IYX8 460 aa16.48■□□□□ 0.23
SCFD1-203ENST00000458591 CCDC112Q8NEF3 446 aa16.48■□□□□ 0.23
SCFD1-203ENST00000458591 FBXO18Q8NFZ0 1043 aa16.48■□□□□ 0.23
SCFD1-203ENST00000458591 SPTLC2O15270 562 aa16.47■□□□□ 0.23
SCFD1-203ENST00000458591 MYSM1Q5VVJ2 828 aa16.47■□□□□ 0.23
SCFD1-203ENST00000458591 CYB5R4Q7L1T6 521 aa16.47■□□□□ 0.23
SCFD1-203ENST00000458591 XPO4Q9C0E2 1151 aaKnown RBP16.47■□□□□ 0.23
SCFD1-203ENST00000458591 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
SCFD1-203ENST00000458591 CIAO1O76071 339 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 MCAMP43121 646 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 DMTNQ08495 405 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 TAF7LQ5H9L4 462 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 PHKBQ93100 1093 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 MROH7-TTC4A0A0A0MT08 1334 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 ZNF142P52746 1687 aaPredicted RBP16.46■□□□□ 0.23
SCFD1-203ENST00000458591 CPLX1O14810 134 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 SMC2O95347 1197 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 CAVIN2O95810 425 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 EVCP57679 992 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 RBM6P78332 1123 aaKnown RBP16.46■□□□□ 0.23
SCFD1-203ENST00000458591 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 MYL10Q9BUA6 226 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 TJP1Q07157 1748 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
SCFD1-203ENST00000458591 ZNF213O14771 459 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 NPHP1O15259 732 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 ZNF202O95125 648 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
SCFD1-203ENST00000458591 PTPN14Q15678 1187 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 HLFQ16534 295 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 AXDND1Q5T1B0 1012 aaPredicted RBP16.45■□□□□ 0.22
SCFD1-203ENST00000458591 TMC6Q7Z403 805 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
SCFD1-203ENST00000458591 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
SCFD1-203ENST00000458591 SNAP23O00161 211 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 PFKFB1P16118 471 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 CDC27P30260 824 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 ARMCX5Q6P1M9 558 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 NYAP1Q6ZVC0 841 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms