RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CCDC184Q52MB2 194 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
HDLBP-227ENST00000458564 FBXO46Q6PJ61 603 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-227ENST00000458564 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 BRCA2P51587 3418 aa13.29□□□□□ -0.28
HDLBP-227ENST00000458564 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
HDLBP-227ENST00000458564 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-227ENST00000458564 FKTNO75072 461 aa13.29□□□□□ -0.28
HDLBP-227ENST00000458564 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
HDLBP-227ENST00000458564 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-227ENST00000458564 INHBEP58166 350 aa13.29□□□□□ -0.28
HDLBP-227ENST00000458564 FOXO4P98177 505 aa13.29□□□□□ -0.28
HDLBP-227ENST00000458564 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
HDLBP-227ENST00000458564 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
HDLBP-227ENST00000458564 ANGEL1Q9UNK9 670 aaKnown RBP13.29□□□□□ -0.28
HDLBP-227ENST00000458564 ECM29Q5VYK3 1845 aa13.28□□□□□ -0.28
HDLBP-227ENST00000458564 SNAP23O00161 211 aa13.28□□□□□ -0.28
HDLBP-227ENST00000458564 VAMP4O75379 141 aa13.28□□□□□ -0.28
HDLBP-227ENST00000458564 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
HDLBP-227ENST00000458564 ZNF804AQ7Z570 1209 aa13.28□□□□□ -0.28
HDLBP-227ENST00000458564 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
HDLBP-227ENST00000458564 MYO1BO43795 1136 aa13.27□□□□□ -0.29
HDLBP-227ENST00000458564 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-227ENST00000458564 TAF5LO75529 589 aa13.27□□□□□ -0.29
HDLBP-227ENST00000458564 PRKG1Q13976 671 aa13.27□□□□□ -0.29
HDLBP-227ENST00000458564 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
HDLBP-227ENST00000458564 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
HDLBP-227ENST00000458564 SUPT20HL1Q3ZLR7 823 aa13.26□□□□□ -0.29
HDLBP-227ENST00000458564 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
HDLBP-227ENST00000458564 HELBQ8NG08 1087 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-227ENST00000458564 SLC10A4Q96EP9 437 aa13.26□□□□□ -0.29
HDLBP-227ENST00000458564 WNK4Q96J92 1243 aa13.26□□□□□ -0.29
HDLBP-227ENST00000458564 FZD1Q9UP38 647 aa13.26□□□□□ -0.29
HDLBP-227ENST00000458564 PCDHAC2Q9Y5I4 1007 aa13.26□□□□□ -0.29
HDLBP-227ENST00000458564 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
HDLBP-227ENST00000458564 F6X3S4 739 aa13.25□□□□□ -0.29
HDLBP-227ENST00000458564 GRM8O00222 908 aa13.25□□□□□ -0.29
HDLBP-227ENST00000458564 LMBR1LQ6UX01 489 aa13.25□□□□□ -0.29
HDLBP-227ENST00000458564 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
HDLBP-227ENST00000458564 PRMT6Q96LA8 375 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-227ENST00000458564 AOX1Q06278 1338 aa13.24□□□□□ -0.29
HDLBP-227ENST00000458564 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
HDLBP-227ENST00000458564 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-227ENST00000458564 IGF2BP3O00425 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDLBP-227ENST00000458564 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
HDLBP-227ENST00000458564 EXOSC9Q06265 439 aaKnown RBP13.24□□□□□ -0.29
HDLBP-227ENST00000458564 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
HDLBP-227ENST00000458564 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
HDLBP-227ENST00000458564 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
HDLBP-227ENST00000458564 CHMP3Q9Y3E7 222 aa13.24□□□□□ -0.29
HDLBP-227ENST00000458564 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-227ENST00000458564 TNFAIP1Q13829 316 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 RASA3Q14644 834 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 NBPF12Q5TAG4 269 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-227ENST00000458564 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 ANKRD13AQ8IZ07 590 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
HDLBP-227ENST00000458564 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
HDLBP-227ENST00000458564 ARAP2Q8WZ64 1704 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 USP2O75604 605 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-227ENST00000458564 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 GJA5P36382 358 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 MFSD14BQ5SR56 506 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
HDLBP-227ENST00000458564 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-227ENST00000458564 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
HDLBP-227ENST00000458564 ERO1AQ96HE7 468 aa13.21□□□□□ -0.29
HDLBP-227ENST00000458564 JAG2Q9Y219 1238 aa13.21□□□□□ -0.29
HDLBP-227ENST00000458564 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
HDLBP-227ENST00000458564 HIBADHP31937 336 aaKnown RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 CRHR2Q13324 411 aa13.2□□□□□ -0.3
HDLBP-227ENST00000458564 FAM84BQ96KN1 310 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 TEPSINQ96N21 525 aa13.2□□□□□ -0.3
HDLBP-227ENST00000458564 PTPN18Q99952 460 aa13.2□□□□□ -0.3
HDLBP-227ENST00000458564 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 C9orf78Q9NZ63 289 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 ZNF70Q9UC06 446 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 TTF2Q9UNY4 1162 aaKnown RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
HDLBP-227ENST00000458564 UTYO14607 1347 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 PLIN1O60240 522 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 GYG1P46976 350 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
HDLBP-227ENST00000458564 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 MS4A4AQ96JQ5 239 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 PTPN22Q9Y2R2 807 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
HDLBP-227ENST00000458564 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
HDLBP-227ENST00000458564 HDLBPQ00341 1268 aaKnown RBP13.18□□□□□ -0.3
HDLBP-227ENST00000458564 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms