RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 UBE3BQ7Z3V4 1068 aa20.91■□□□□ 0.94
SHF-202ENST00000458022 IRS2Q9Y4H2 1338 aa20.9■□□□□ 0.94
SHF-202ENST00000458022 IREB2P48200 963 aaKnown RBP20.9■□□□□ 0.94
SHF-202ENST00000458022 SP3Q02447 781 aa20.9■□□□□ 0.94
SHF-202ENST00000458022 MPHOSPH8Q99549 860 aa20.9■□□□□ 0.94
SHF-202ENST00000458022 PCDHAC2Q9Y5I4 1007 aa20.9■□□□□ 0.94
SHF-202ENST00000458022 SPDYE2BA6NHP3 402 aa20.89■□□□□ 0.93
SHF-202ENST00000458022 MYO1BO43795 1136 aa20.89■□□□□ 0.93
SHF-202ENST00000458022 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
SHF-202ENST00000458022 SPDYE6P0CI01 402 aa20.89■□□□□ 0.93
SHF-202ENST00000458022 KCNJ4P48050 445 aa20.89■□□□□ 0.93
SHF-202ENST00000458022 CHRNDQ07001 517 aa20.89■□□□□ 0.93
SHF-202ENST00000458022 NBPF12Q5TAG4 269 aaPredicted RBP20.89■□□□□ 0.93
SHF-202ENST00000458022 C15orf52Q6ZUT6 534 aaKnown RBP20.89■□□□□ 0.93
SHF-202ENST00000458022 PTPN18Q99952 460 aa20.89■□□□□ 0.93
SHF-202ENST00000458022 RBBP6Q7Z6E9 1792 aaKnown RBP20.89■□□□□ 0.93
SHF-202ENST00000458022 CLRN2A0PK11 232 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 APAF1O14727 1248 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 CSF1RP07333 972 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 CAP1Q01518 475 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 CFAP100Q494V2 611 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 ANKRD13AQ8IZ07 590 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 TSPYL6Q8N831 410 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 ZNF333Q96JL9 665 aa20.88■□□□□ 0.93
SHF-202ENST00000458022 PRMT6Q96LA8 375 aaPredicted RBP20.88■□□□□ 0.93
SHF-202ENST00000458022 LAMB1P07942 1786 aa20.87■□□□□ 0.93
SHF-202ENST00000458022 FKBP1AP62942 108 aaKnown RBP20.87■□□□□ 0.93
SHF-202ENST00000458022 TMEM106CQ9BVX2 250 aa20.87■□□□□ 0.93
SHF-202ENST00000458022 CASP7P55210 303 aa20.86■□□□□ 0.93
SHF-202ENST00000458022 GCKRQ14397 625 aa20.86■□□□□ 0.93
SHF-202ENST00000458022 VEZTQ9HBM0 779 aa20.86■□□□□ 0.93
SHF-202ENST00000458022 SPEF2Q9C093 1822 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 AOX1Q06278 1338 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 F8W031 263 aaPredicted RBP20.85■□□□□ 0.93
SHF-202ENST00000458022 SNAP23O00161 211 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 IL1R1P14778 569 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 RASA3Q14644 834 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 STK31Q9BXU1 1019 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 BRCA2P51587 3418 aa20.85■□□□□ 0.93
SHF-202ENST00000458022 KIAA0100Q14667 2235 aaKnown RBP20.84■□□□□ 0.93
SHF-202ENST00000458022 OPTNQ96CV9 577 aa20.84■□□□□ 0.93
SHF-202ENST00000458022 MS4A4AQ96JQ5 239 aa20.84■□□□□ 0.93
SHF-202ENST00000458022 COLQQ9Y215 455 aaPredicted RBP20.84■□□□□ 0.93
SHF-202ENST00000458022 CENPFP49454 3210 aa20.83■□□□□ 0.93
SHF-202ENST00000458022 MYH3P11055 1940 aa20.83■□□□□ 0.93
SHF-202ENST00000458022 ARHGEF6Q15052 776 aa20.83■□□□□ 0.93
SHF-202ENST00000458022 G2E3Q7L622 706 aa20.83■□□□□ 0.93
SHF-202ENST00000458022 ZNF804AQ7Z570 1209 aa20.83■□□□□ 0.93
SHF-202ENST00000458022 ELP3Q9H9T3 547 aa20.83■□□□□ 0.93
SHF-202ENST00000458022 ANKRD18BA2A2Z9 1011 aa20.82■□□□□ 0.92
SHF-202ENST00000458022 TAF5LO75529 589 aa20.82■□□□□ 0.92
SHF-202ENST00000458022 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
SHF-202ENST00000458022 NBPF11Q86T75 865 aa20.82■□□□□ 0.92
SHF-202ENST00000458022 PTCH2Q9Y6C5 1203 aa20.82■□□□□ 0.92
SHF-202ENST00000458022 TNFAIP1Q13829 316 aa20.81■□□□□ 0.92
SHF-202ENST00000458022 HELBQ8NG08 1087 aaPredicted RBP20.81■□□□□ 0.92
SHF-202ENST00000458022 BRI3BPQ8WY22 251 aa20.81■□□□□ 0.92
SHF-202ENST00000458022 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
SHF-202ENST00000458022 RBM5P52756 815 aaKnown RBP eCLIP20.8■□□□□ 0.92
SHF-202ENST00000458022 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
SHF-202ENST00000458022 SPDYE2Q495Y8 402 aa20.8■□□□□ 0.92
SHF-202ENST00000458022 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
SHF-202ENST00000458022 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
SHF-202ENST00000458022 TAF1CQ15572 869 aaPredicted RBP20.79■□□□□ 0.92
SHF-202ENST00000458022 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.79■□□□□ 0.92
SHF-202ENST00000458022 LINS1Q8NG48 757 aa20.79■□□□□ 0.92
SHF-202ENST00000458022 JAG2Q9Y219 1238 aa20.79■□□□□ 0.92
SHF-202ENST00000458022 CCL15-CCL14A0A0B4J2E2 113 aa20.78■□□□□ 0.92
SHF-202ENST00000458022 GTF2A2P52657 109 aa20.78■□□□□ 0.92
SHF-202ENST00000458022 CCL15Q16663 113 aa20.78■□□□□ 0.92
SHF-202ENST00000458022 SLC4A8Q2Y0W8 1093 aa20.78■□□□□ 0.92
SHF-202ENST00000458022 TSR2Q969E8 191 aaKnown RBP20.78■□□□□ 0.92
SHF-202ENST00000458022 TEPSINQ96N21 525 aa20.78■□□□□ 0.92
SHF-202ENST00000458022 ZNF70Q9UC06 446 aaPredicted RBP20.78■□□□□ 0.92
SHF-202ENST00000458022 FAM205AQ6ZU69 1335 aa20.78■□□□□ 0.92
SHF-202ENST00000458022 ECM29Q5VYK3 1845 aa20.77■□□□□ 0.92
SHF-202ENST00000458022 FLIIQ13045 1269 aa20.77■□□□□ 0.92
SHF-202ENST00000458022 IFIT5Q13325 482 aaKnown RBP20.77■□□□□ 0.92
SHF-202ENST00000458022 TWISTNBQ3B726 338 aaPredicted RBP20.77■□□□□ 0.92
SHF-202ENST00000458022 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.92
SHF-202ENST00000458022 CNKSR2Q8WXI2 1034 aa20.77■□□□□ 0.92
SHF-202ENST00000458022 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.92
SHF-202ENST00000458022 SERPINA10Q9UK55 444 aa20.77■□□□□ 0.92
SHF-202ENST00000458022 H0YGN5 161 aa20.76■□□□□ 0.91
SHF-202ENST00000458022 MAP3K9P80192 1104 aa20.76■□□□□ 0.91
SHF-202ENST00000458022 FOXO4P98177 505 aa20.76■□□□□ 0.91
SHF-202ENST00000458022 VGLL4Q14135 290 aa20.76■□□□□ 0.91
SHF-202ENST00000458022 CDAN1Q8IWY9 1227 aa20.76■□□□□ 0.91
SHF-202ENST00000458022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHF-202ENST00000458022 OTUD5Q96G74 571 aa20.76■□□□□ 0.91
SHF-202ENST00000458022 TDRD3Q9H7E2 651 aaKnown RBP20.75■□□□□ 0.91
SHF-202ENST00000458022 FKBP5Q13451 457 aaPredicted RBP20.74■□□□□ 0.91
SHF-202ENST00000458022 MFSD14BQ5SR56 506 aa20.74■□□□□ 0.91
SHF-202ENST00000458022 TDRD7Q8NHU6 1098 aaKnown RBP20.74■□□□□ 0.91
SHF-202ENST00000458022 TTF2Q9UNY4 1162 aaKnown RBP20.74■□□□□ 0.91
SHF-202ENST00000458022 CSADQ9Y600 493 aa20.74■□□□□ 0.91
SHF-202ENST00000458022 TLR2O60603 784 aa20.73■□□□□ 0.91
SHF-202ENST00000458022 DZIP1LQ8IYY4 767 aaKnown RBP20.73■□□□□ 0.91
SHF-202ENST00000458022 SH3TC2Q8TF17 1288 aa20.73■□□□□ 0.91
SHF-202ENST00000458022 TMEM39BQ9GZU3 492 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms