RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 EPHX2P34913 555 aa22.37■■□□□ 1.17
TRIM13-206ENST00000457662 EPS15P42566 896 aa22.37■■□□□ 1.17
TRIM13-206ENST00000457662 PHKA1P46020 1223 aa22.37■■□□□ 1.17
TRIM13-206ENST00000457662 HDAC1Q13547 482 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-206ENST00000457662 CLASRPQ8N2M8 674 aaKnown RBP22.37■■□□□ 1.17
TRIM13-206ENST00000457662 EAF2Q96CJ1 260 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-206ENST00000457662 TAF1DQ9H5J8 278 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-206ENST00000457662 SEMA3EO15041 775 aa22.36■■□□□ 1.17
TRIM13-206ENST00000457662 MMP14P50281 582 aa22.36■■□□□ 1.17
TRIM13-206ENST00000457662 C16orf71Q8IYS4 520 aaPredicted RBP22.36■■□□□ 1.17
TRIM13-206ENST00000457662 LRRCC1Q9C099 1032 aa22.36■■□□□ 1.17
TRIM13-206ENST00000457662 PNMA8AQ86V59 439 aaPredicted RBP22.35■■□□□ 1.17
TRIM13-206ENST00000457662 TBC1D22AQ8WUA7 517 aa22.35■■□□□ 1.17
TRIM13-206ENST00000457662 MXD3Q9BW11 206 aa22.35■■□□□ 1.17
TRIM13-206ENST00000457662 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
TRIM13-206ENST00000457662 IL1RAPL2Q9NP60 686 aa22.35■■□□□ 1.17
TRIM13-206ENST00000457662 ADARB2Q9NS39 739 aaKnown RBP22.35■■□□□ 1.17
TRIM13-206ENST00000457662 DENND2AQ9ULE3 1009 aa22.35■■□□□ 1.17
TRIM13-206ENST00000457662 USP17L8P0C7I0 530 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 CCDC158Q5M9N0 1113 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 AACSQ86V21 672 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 MICALL2Q8IY33 904 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 DBNDD2Q9BQY9 259 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
TRIM13-206ENST00000457662 CHAF1AQ13111 956 aaPredicted RBP22.34■■□□□ 1.17
TRIM13-206ENST00000457662 MFSD14BQ5SR56 506 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 USP50Q70EL3 339 aaPredicted RBP22.34■■□□□ 1.17
TRIM13-206ENST00000457662 OGFOD1Q8N543 542 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 WDR66Q8TBY9 1149 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 ARAP2Q8WZ64 1704 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 JAG2Q9Y219 1238 aa22.34■■□□□ 1.17
TRIM13-206ENST00000457662 UQCRFS1P1P0C7P4 283 aa22.33■■□□□ 1.16
TRIM13-206ENST00000457662 CERS5Q8N5B7 392 aa22.33■■□□□ 1.16
TRIM13-206ENST00000457662 DBNLQ9UJU6 430 aaKnown RBP22.33■■□□□ 1.16
TRIM13-206ENST00000457662 TOMM70O94826 608 aa22.32■■□□□ 1.16
TRIM13-206ENST00000457662 IFIT2P09913 472 aaKnown RBP22.32■■□□□ 1.16
TRIM13-206ENST00000457662 ZNF280AP59817 542 aaPredicted RBP22.32■■□□□ 1.16
TRIM13-206ENST00000457662 GCC1Q96CN9 775 aa22.32■■□□□ 1.16
TRIM13-206ENST00000457662 ARID4AP29374 1257 aaPredicted RBP22.31■■□□□ 1.16
TRIM13-206ENST00000457662 TTC39AQ5SRH9 613 aa22.31■■□□□ 1.16
TRIM13-206ENST00000457662 KIAA0825Q8IV33 1275 aa22.31■■□□□ 1.16
TRIM13-206ENST00000457662 ZNF512BQ96KM6 892 aaPredicted RBP22.31■■□□□ 1.16
TRIM13-206ENST00000457662 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
TRIM13-206ENST00000457662 SHTN1A0MZ66 631 aa22.3■■□□□ 1.16
TRIM13-206ENST00000457662 RASGRF1Q13972 1273 aa22.3■■□□□ 1.16
TRIM13-206ENST00000457662 EAPPQ56P03 285 aaPredicted RBP22.3■■□□□ 1.16
TRIM13-206ENST00000457662 SUGT1Q9Y2Z0 365 aa22.3■■□□□ 1.16
TRIM13-206ENST00000457662 PDS5AQ29RF7 1337 aaKnown RBP22.3■■□□□ 1.16
TRIM13-206ENST00000457662 BCL11AQ9H165 835 aa22.29■■□□□ 1.16
TRIM13-206ENST00000457662 TLR7Q9NYK1 1049 aaKnown RBP22.29■■□□□ 1.16
TRIM13-206ENST00000457662 ZNF646O15015 1829 aaPredicted RBP22.29■■□□□ 1.16
TRIM13-206ENST00000457662 SMARCA5O60264 1052 aaPredicted RBP22.28■■□□□ 1.16
TRIM13-206ENST00000457662 SAMD7Q7Z3H4 446 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 RBM46Q8TBY0 533 aaKnown RBP22.28■■□□□ 1.16
TRIM13-206ENST00000457662 TBC1D10BQ4KMP7 808 aaPredicted RBP22.28■■□□□ 1.16
TRIM13-206ENST00000457662 RBM26Q5T8P6 1007 aaKnown RBP22.28■■□□□ 1.16
TRIM13-206ENST00000457662 ZGPATQ8N5A5 531 aaKnown RBP22.28■■□□□ 1.16
TRIM13-206ENST00000457662 SPATA5Q8NB90 893 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 MYOZ2Q9NPC6 264 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 HMG20BQ9P0W2 317 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 ZBTB47Q9UFB7 747 aaPredicted RBP22.28■■□□□ 1.16
TRIM13-206ENST00000457662 CLEC11AQ9Y240 323 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 SALL1Q9NSC2 1324 aa22.28■■□□□ 1.16
TRIM13-206ENST00000457662 F8W031 263 aaPredicted RBP22.27■■□□□ 1.16
TRIM13-206ENST00000457662 IGHDP01880 384 aa22.27■■□□□ 1.16
TRIM13-206ENST00000457662 TRPM4Q8TD43 1214 aa22.27■■□□□ 1.16
TRIM13-206ENST00000457662 ZC3H15Q8WU90 426 aaKnown RBP22.27■■□□□ 1.16
TRIM13-206ENST00000457662 TTF2Q9UNY4 1162 aaKnown RBP22.27■■□□□ 1.16
TRIM13-206ENST00000457662 MYH13Q9UKX3 1938 aa22.26■■□□□ 1.15
TRIM13-206ENST00000457662 MCAMP43121 646 aa22.26■■□□□ 1.15
TRIM13-206ENST00000457662 HIRAP54198 1017 aaPredicted RBP22.26■■□□□ 1.15
TRIM13-206ENST00000457662 KIF4BQ2VIQ3 1234 aa22.26■■□□□ 1.15
TRIM13-206ENST00000457662 SMC5Q8IY18 1101 aa22.26■■□□□ 1.15
TRIM13-206ENST00000457662 COL1A1P02452 1464 aaPredicted RBP22.25■■□□□ 1.15
TRIM13-206ENST00000457662 NEFLP07196 543 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 POTEIP0CG38 1075 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 POTEJP0CG39 1038 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 SCARF1Q14162 830 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 ANKRD45Q5TZF3 282 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 SMC1BQ8NDV3 1235 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
TRIM13-206ENST00000457662 EGFRP00533 1210 aa22.24■■□□□ 1.15
TRIM13-206ENST00000457662 HDLBPQ00341 1268 aaKnown RBP22.24■■□□□ 1.15
TRIM13-206ENST00000457662 SPTY2D1Q68D10 685 aaPredicted RBP22.24■■□□□ 1.15
TRIM13-206ENST00000457662 CHADLQ6NUI6 762 aa22.24■■□□□ 1.15
TRIM13-206ENST00000457662 PGAP2Q9UHJ9 254 aa22.24■■□□□ 1.15
TRIM13-206ENST00000457662 MAST3O60307 1309 aa22.23■■□□□ 1.15
TRIM13-206ENST00000457662 LDHBP07195 334 aaKnown RBP22.23■■□□□ 1.15
TRIM13-206ENST00000457662 FSTL1Q12841 308 aa22.23■■□□□ 1.15
TRIM13-206ENST00000457662 GRIK5Q16478 980 aa22.23■■□□□ 1.15
TRIM13-206ENST00000457662 MTMR14Q8NCE2 650 aa22.23■■□□□ 1.15
TRIM13-206ENST00000457662 SERPINA10Q9UK55 444 aa22.23■■□□□ 1.15
TRIM13-206ENST00000457662 DLGAP5Q15398 846 aa22.22■■□□□ 1.15
TRIM13-206ENST00000457662 PI16Q6UXB8 463 aa22.22■■□□□ 1.15
TRIM13-206ENST00000457662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.22■■□□□ 1.15
TRIM13-206ENST00000457662 SNRKQ9NRH2 765 aa22.22■■□□□ 1.15
TRIM13-206ENST00000457662 ABCF2Q9UG63 623 aa22.22■■□□□ 1.15
TRIM13-206ENST00000457662 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
TRIM13-206ENST00000457662 WNT10BO00744 389 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms