RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 CELF1Q92879 486 aaKnown RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 ZSCAN31Q96LW9 406 aaPredicted RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 SETDB2Q96T68 719 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 LMBRD1Q9NUN5 540 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 SMC3Q9UQE7 1217 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 GOLGA6L22H0YM25 854 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 GJB2P29033 226 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 ADD2P35612 726 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 HAND2P61296 217 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 Q6ZUG5 572 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 SPATA5Q8NB90 893 aa13.56□□□□□ -0.24
TCF4-204ENST00000457482 SH2B1Q9NRF2 756 aaPredicted RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.56□□□□□ -0.24
TCF4-204ENST00000457482 GPAA1O43292 621 aa13.55□□□□□ -0.24
TCF4-204ENST00000457482 PRPF40AO75400 957 aaKnown RBP13.55□□□□□ -0.24
TCF4-204ENST00000457482 SYT1P21579 422 aa13.55□□□□□ -0.24
TCF4-204ENST00000457482 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
TCF4-204ENST00000457482 ZNF532Q9HCE3 1301 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 E7EWF7 191 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 FGAP02671 866 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 UQCRFS1P1P0C7P4 283 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 ANKRD18AQ8IVF6 992 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
TCF4-204ENST00000457482 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
TCF4-204ENST00000457482 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
TCF4-204ENST00000457482 PDE6AP16499 860 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 LRRFIP1Q32MZ4 808 aaKnown RBP13.54□□□□□ -0.24
TCF4-204ENST00000457482 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■■ 33.9
TCF4-204ENST00000457482 DOCK2Q92608 1830 aa13.54□□□□□ -0.24
TCF4-204ENST00000457482 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 RFC4P35249 363 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 TTF1Q15361 905 aaPredicted RBP13.53□□□□□ -0.24
TCF4-204ENST00000457482 BRF1Q92994 677 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
TCF4-204ENST00000457482 WDR33Q9C0J8 1336 aaKnown RBP13.53□□□□□ -0.24
TCF4-204ENST00000457482 STX6O43752 255 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 GYG1P46976 350 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 ANKRD1Q15327 319 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 ANO8Q9HCE9 1232 aaPredicted RBP13.53□□□□□ -0.24
TCF4-204ENST00000457482 MINPP1Q9UNW1 487 aa13.53□□□□□ -0.24
TCF4-204ENST00000457482 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
TCF4-204ENST00000457482 TRIM37O94972 964 aa13.52□□□□□ -0.24
TCF4-204ENST00000457482 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.24
TCF4-204ENST00000457482 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.24
TCF4-204ENST00000457482 UBR3Q6ZT12 1888 aa13.52□□□□□ -0.25
TCF4-204ENST00000457482 EXOSC10Q01780 885 aaKnown RBP13.52□□□□□ -0.25
TCF4-204ENST00000457482 UBE3CQ15386 1083 aa13.52□□□□□ -0.25
TCF4-204ENST00000457482 SKOR2Q2VWA4 1001 aaPredicted RBP13.52□□□□□ -0.25
TCF4-204ENST00000457482 DHX32Q7L7V1 743 aaKnown RBP13.52□□□□□ -0.25
TCF4-204ENST00000457482 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
TCF4-204ENST00000457482 GPT2Q8TD30 523 aa13.52□□□□□ -0.25
TCF4-204ENST00000457482 NYXQ9GZU5 481 aa13.52□□□□□ -0.25
TCF4-204ENST00000457482 NSFL1CQ9UNZ2 370 aaKnown RBP13.52□□□□□ -0.25
TCF4-204ENST00000457482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
TCF4-204ENST00000457482 RGL2O15211 777 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
TCF4-204ENST00000457482 KLRK1P26718 216 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 ZSCAN25Q6NSZ9 544 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 TPTE2Q6XPS3 522 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
TCF4-204ENST00000457482 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 JAK2O60674 1132 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 NCLP19338 710 aaKnown RBP13.51□□□□□ -0.25
TCF4-204ENST00000457482 PTMSP20962 102 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 APOBRQ0VD83 1088 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 NFIXQ14938 502 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 KLHL40Q2TBA0 621 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
TCF4-204ENST00000457482 COL1A1P02452 1464 aaPredicted RBP13.5□□□□□ -0.25
TCF4-204ENST00000457482 TM4SF1P30408 202 aa13.5□□□□□ -0.25
TCF4-204ENST00000457482 FGD1P98174 961 aa13.5□□□□□ -0.25
TCF4-204ENST00000457482 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
TCF4-204ENST00000457482 MTMR6Q9Y217 621 aa13.5□□□□□ -0.25
TCF4-204ENST00000457482 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
TCF4-204ENST00000457482 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
TCF4-204ENST00000457482 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
TCF4-204ENST00000457482 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
TCF4-204ENST00000457482 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 NPHP1O15259 732 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 F13A1P00488 732 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 APPP05067 770 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
TCF4-204ENST00000457482 SCRN1Q12765 414 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 CAVIN1Q6NZI2 390 aaKnown RBP13.49□□□□□ -0.25
TCF4-204ENST00000457482 STRBPQ96SI9 672 aaKnown RBP13.49□□□□□ -0.25
TCF4-204ENST00000457482 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
TCF4-204ENST00000457482 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 VPS37CA5D8V6 355 aaPredicted RBP13.49□□□□□ -0.25
TCF4-204ENST00000457482 MBD4O95243 580 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 AIDAQ96BJ3 306 aa13.49□□□□□ -0.25
TCF4-204ENST00000457482 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms