RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 MMTAG2Q9BU76 263 aaKnown RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 UBA5Q9GZZ9 404 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 GZF1Q9H116 711 aaPredicted RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 CREBZFQ9NS37 354 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 NEURL1BA8MQ27 555 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 HMGB1P1B2RPK0 211 aaPredicted RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 KDM4AO75164 1064 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 HMMRO75330 724 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 STARD3NLO95772 234 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 NBPF7P0C2Y1 421 aaPredicted RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 USP8P40818 1118 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 GPS2Q13227 327 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 MMS22LQ6ZRQ5 1243 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 EFCAB13Q8IY85 973 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 CACTIN-AS1Q8N1I8 211 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 SSH3Q8TE77 659 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 PPM1EQ8WY54 764 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 SMARCC1Q92922 1105 aaPredicted RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 SH3GL3Q99963 347 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 MTA3Q9BTC8 594 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 CHCHD3Q9NX63 227 aaKnown RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 PSD3Q9NYI0 1048 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 SUN2Q9UH99 717 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 LRRFIP2Q9Y608 721 aaKnown RBP7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 PALLDQ8WX93 1383 aa7.99□□□□□ -1.13
CUBNP3-201ENST00000457461 MYH3P11055 1940 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 GRM8O00222 908 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 PIP4K2AP48426 406 aaPredicted RBP7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 INHBEP58166 350 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 AIMP1Q12904 312 aaKnown RBP7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 CWF19L2Q2TBE0 894 aaKnown RBP7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 RNF20Q5VTR2 975 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 WWC2Q6AWC2 1192 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 TTLL5Q6EMB2 1281 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 TTLL7Q6ZT98 887 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 CHD1LQ86WJ1 897 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 CXorf38Q8TB03 319 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 VEZTQ9HBM0 779 aa7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 CWC25Q9NXE8 425 aaPredicted RBP7.98□□□□□ -1.13
CUBNP3-201ENST00000457461 LOC102724428A0A0B4J2F2 783 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 PNMA6EA0A0J9YXQ4 647 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 TMCO5BA8MYB1 307 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 KCNQ2O43526 872 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 NUBP1P53384 320 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 CASP7P55210 303 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 SIK1P57059 783 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 NEXNQ0ZGT2 675 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 GCKRQ14397 625 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 PDIA5Q14554 519 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 PPP2R5AQ15172 486 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 CAVIN1Q6NZI2 390 aaKnown RBP7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 SRLQ86TD4 932 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 SYTL4Q96C24 671 aaPredicted RBP7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 ACSBG1Q96GR2 724 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 KAZALD1Q96I82 304 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 SCN7AQ01118 1682 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 EP400Q96L91 3159 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 BAG4O95429 457 aaKnown RBP7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 TPM1P09493 284 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 IL6STP40189 918 aaPredicted RBP7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 TRIM28Q13263 835 aaKnown RBP7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 MCM6Q14566 821 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 SLC5A9Q2M3M2 681 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 FILIP1LQ4L180 1135 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 AP1ARQ63HQ0 302 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 MYD88Q99836 296 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 ISCA1Q9BUE6 129 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 ZBTB1Q9Y2K1 713 aa7.97□□□□□ -1.13
CUBNP3-201ENST00000457461 LAMB2P55268 1798 aa7.96□□□□□ -1.13
CUBNP3-201ENST00000457461 ATP8B1O43520 1251 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 KINO60870 393 aaKnown RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 IVLP07476 585 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 IMPDH2P12268 514 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 EIF5P55010 431 aaKnown RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 CCT2P78371 535 aaKnown RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 TMED1Q13445 227 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 ITPK1Q13572 414 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 KLHL10Q6JEL2 608 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 INTS5Q6P9B9 1019 aaKnown RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 SEPT12Q8IYM1 358 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 ZNF397Q8NF99 534 aaPredicted RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 CCDC26Q8TAB7 109 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 GOLGA5Q8TBA6 731 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 SYAP1Q96A49 352 aaPredicted RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 TBC1D32Q96NH3 1257 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 UTP14AQ9BVJ6 771 aaKnown RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 MAF1Q9H063 256 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 QTRT2Q9H974 415 aaKnown RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 C9orf78Q9NZ63 289 aaPredicted RBP7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 MAP3K15Q6ZN16 1313 aa7.96□□□□□ -1.14
CUBNP3-201ENST00000457461 PITPNM1O00562 1244 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 RPS6KA5O75582 802 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 SMC2O95347 1197 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 SSFA2P28290 1259 aa7.95□□□□□ -1.14
CUBNP3-201ENST00000457461 PRPHP41219 470 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms