RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, human

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM12-205	ENST00000456842	MROH5	Q6ZUA9	1318 aa		33.25	■■■□□ 2.91
SMIM12-205	ENST00000456842	BRPF1	P55201	1214 aa	Predicted RBP	33.24	■■■□□ 2.91
SMIM12-205	ENST00000456842	PRDM10	Q9NQV6	1147 aa		33.24	■■■□□ 2.91
SMIM12-205	ENST00000456842	PCDHAC2	Q9Y5I4	1007 aa		33.24	■■■□□ 2.91
SMIM12-205	ENST00000456842	HIBADH	P31937	336 aa	Known RBP	33.23	■■■□□ 2.91
SMIM12-205	ENST00000456842	MOB2	Q70IA6	237 aa		33.22	■■■□□ 2.91
SMIM12-205	ENST00000456842	TDRD7	Q8NHU6	1098 aa	Known RBP	33.22	■■■□□ 2.91
SMIM12-205	ENST00000456842	ZBED3	Q96IU2	234 aa	Predicted RBP	33.22	■■■□□ 2.91
SMIM12-205	ENST00000456842	BEGAIN	Q9BUH8	593 aa		33.22	■■■□□ 2.91
SMIM12-205	ENST00000456842	TSKS	Q9UJT2	592 aa		33.22	■■■□□ 2.91
SMIM12-205	ENST00000456842	THSD7B	Q9C0I4	1608 aa		33.21	■■■□□ 2.91
SMIM12-205	ENST00000456842	MMP14	P50281	582 aa		33.21	■■■□□ 2.91
SMIM12-205	ENST00000456842	UBTFL1	P0CB47	393 aa	Predicted RBP	33.2	■■■□□ 2.91
SMIM12-205	ENST00000456842	RFX5	P48382	616 aa	Predicted RBP	33.2	■■■□□ 2.91
SMIM12-205	ENST00000456842	ZNF157	P51786	506 aa	Predicted RBP	33.2	■■■□□ 2.91
SMIM12-205	ENST00000456842	DLGAP5	Q15398	846 aa		33.2	■■■□□ 2.91
SMIM12-205	ENST00000456842	VGLL2	Q8N8G2	317 aa		33.2	■■■□□ 2.91
SMIM12-205	ENST00000456842	FAM155A	B1AL88	458 aa	Predicted RBP	33.19	■■■□□ 2.9
SMIM12-205	ENST00000456842	CAPN15	O75808	1086 aa		33.19	■■■□□ 2.9
SMIM12-205	ENST00000456842	NOG	Q13253	232 aa		33.19	■■■□□ 2.9
SMIM12-205	ENST00000456842	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	33.19	■■■□□ 2.9
SMIM12-205	ENST00000456842	CFAP100	Q494V2	611 aa		33.18	■■■□□ 2.9
SMIM12-205	ENST00000456842	FAM205A	Q6ZU69	1335 aa		33.18	■■■□□ 2.9
SMIM12-205	ENST00000456842	PDE8B	O95263	885 aa		33.17	■■■□□ 2.9
SMIM12-205	ENST00000456842	FKBP1A	P62942	108 aa	Known RBP	33.17	■■■□□ 2.9
SMIM12-205	ENST00000456842	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.17	■■■□□ 2.9
SMIM12-205	ENST00000456842	FBXO33	Q7Z6M2	555 aa		33.17	■■■□□ 2.9
SMIM12-205	ENST00000456842	PTPN12	Q05209	780 aa	Known RBP	33.16	■■■□□ 2.9
SMIM12-205	ENST00000456842	MEIS3	Q99687	375 aa		33.16	■■■□□ 2.9
SMIM12-205	ENST00000456842	TNN	Q9UQP3	1299 aa		33.16	■■■□□ 2.9
SMIM12-205	ENST00000456842	UBE2Q2L	H0YL09	131 aa		33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	EYA2	O00167	538 aa		33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	BCAR3	O75815	825 aa		33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	AOX1	Q06278	1338 aa		33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	MFSD14B	Q5SR56	506 aa		33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	CCDC102A	Q96A19	550 aa		33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	LRRFIP2	Q9Y608	721 aa	Known RBP	33.15	■■■□□ 2.9
SMIM12-205	ENST00000456842	KIF23	Q02241	960 aa	Predicted RBP	33.14	■■■□□ 2.9
SMIM12-205	ENST00000456842	VPS37D	Q86XT2	251 aa		33.14	■■■□□ 2.9
SMIM12-205	ENST00000456842	APOBEC3F	Q8IUX4	373 aa	Known RBP	33.14	■■■□□ 2.9
SMIM12-205	ENST00000456842	MTMR14	Q8NCE2	650 aa		33.14	■■■□□ 2.9
SMIM12-205	ENST00000456842	PRMT6	Q96LA8	375 aa	Predicted RBP	33.14	■■■□□ 2.9
SMIM12-205	ENST00000456842	KIF16B	Q96L93	1317 aa		33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	CLRN2	A0PK11	232 aa		33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	BCAM	P50895	628 aa		33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	CHAF1A	Q13111	956 aa	Predicted RBP	33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	TTLL12	Q14166	644 aa	Predicted RBP	33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	ARHGAP45	Q92619	1136 aa		33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	SIL1	Q9H173	461 aa		33.13	■■■□□ 2.89
SMIM12-205	ENST00000456842	SLC10A3	P09131	477 aa		33.12	■■■□□ 2.89
SMIM12-205	ENST00000456842	RBM5	P52756	815 aa	Known RBP eCLIP	33.12	■■■□□ 2.89
SMIM12-205	ENST00000456842	FKBP1B	P68106	108 aa		33.12	■■■□□ 2.89
SMIM12-205	ENST00000456842	SPDYE2B	A6NHP3	402 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	SPDYE6	P0CI01	402 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	FGFR2	P21802	821 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	PRKG1	Q13976	671 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	GRIK5	Q16478	980 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	CAVIN4	Q5BKX8	364 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	ATG9A	Q7Z3C6	839 aa		33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	FRAT1	Q92837	279 aa	Predicted RBP	33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	TTF2	Q9UNY4	1162 aa	Known RBP	33.11	■■■□□ 2.89
SMIM12-205	ENST00000456842	INTS3	Q68E01	1043 aa	Known RBP	33.1	■■■□□ 2.89
SMIM12-205	ENST00000456842	FRAT2	O75474	233 aa	Predicted RBP	33.09	■■■□□ 2.89
SMIM12-205	ENST00000456842	PUM3	Q15397	648 aa	Known RBP	33.09	■■■□□ 2.89
SMIM12-205	ENST00000456842	RASAL3	Q86YV0	1011 aa		33.09	■■■□□ 2.89
SMIM12-205	ENST00000456842	DEFB129	Q9H1M3	183 aa		33.09	■■■□□ 2.89
SMIM12-205	ENST00000456842	PA2G4	Q9UQ80	394 aa	Known RBP	33.09	■■■□□ 2.89
SMIM12-205	ENST00000456842	NF2	P35240	595 aa		33.08	■■■□□ 2.89
SMIM12-205	ENST00000456842	VEZT	Q9HBM0	779 aa		33.08	■■■□□ 2.89
SMIM12-205	ENST00000456842	FZD1	Q9UP38	647 aa		33.08	■■■□□ 2.89
SMIM12-205	ENST00000456842	IFIT1	P09914	478 aa	Known RBP	33.07	■■■□□ 2.88
SMIM12-205	ENST00000456842	TRIM27	P14373	513 aa		33.07	■■■□□ 2.88
SMIM12-205	ENST00000456842	PAPPA2	Q9BXP8	1791 aa		33.06	■■■□□ 2.88
SMIM12-205	ENST00000456842	CLUAP1	Q96AJ1	413 aa		33.06	■■■□□ 2.88
SMIM12-205	ENST00000456842	IPO8	O15397	1037 aa	Known RBP	33.05	■■■□□ 2.88
SMIM12-205	ENST00000456842	CA12	O43570	354 aa		33.05	■■■□□ 2.88
SMIM12-205	ENST00000456842	MYO1B	O43795	1136 aa		33.05	■■■□□ 2.88
SMIM12-205	ENST00000456842	SLC5A1	P13866	664 aa		33.04	■■■□□ 2.88
SMIM12-205	ENST00000456842	ATF7IP	Q6VMQ6	1270 aa		33.04	■■■□□ 2.88
SMIM12-205	ENST00000456842	CSRNP1	Q96S65	589 aa		33.04	■■■□□ 2.88
SMIM12-205	ENST00000456842	HDAC5	Q9UQL6	1122 aa		33.04	■■■□□ 2.88
SMIM12-205	ENST00000456842	LPIN2	Q92539	896 aa		33.03	■■■□□ 2.88
SMIM12-205	ENST00000456842	CIAO1	O76071	339 aa		33.02	■■■□□ 2.88
SMIM12-205	ENST00000456842	TDRD3	Q9H7E2	651 aa	Known RBP	33.02	■■■□□ 2.88
SMIM12-205	ENST00000456842	CEP126	Q9P2H0	1117 aa		33.02	■■■□□ 2.88
SMIM12-205	ENST00000456842	SERPINA10	Q9UK55	444 aa		33.02	■■■□□ 2.88
SMIM12-205	ENST00000456842	ANGEL1	Q9UNK9	670 aa	Known RBP	33.02	■■■□□ 2.88
SMIM12-205	ENST00000456842	GNAI3	P08754	354 aa		33.01	■■■□□ 2.87
SMIM12-205	ENST00000456842	CRK	P46108	304 aa		33.01	■■■□□ 2.87
SMIM12-205	ENST00000456842	ARMC9	Q7Z3E5	817 aa		33.01	■■■□□ 2.87
SMIM12-205	ENST00000456842	ZNF70	Q9UC06	446 aa	Predicted RBP	33.01	■■■□□ 2.87
SMIM12-205	ENST00000456842	MKRN3	Q13064	507 aa	Known RBP	33	■■■□□ 2.87
SMIM12-205	ENST00000456842	DZIP1L	Q8IYY4	767 aa	Known RBP	33	■■■□□ 2.87
SMIM12-205	ENST00000456842	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33	■■■□□ 2.87
SMIM12-205	ENST00000456842	TRPA1	O75762	1119 aa		32.99	■■■□□ 2.87
SMIM12-205	ENST00000456842	RASA3	Q14644	834 aa		32.99	■■■□□ 2.87
SMIM12-205	ENST00000456842	ATP2B3	Q16720	1220 aa		32.99	■■■□□ 2.87
SMIM12-205	ENST00000456842	NBPF12	Q5TAG4	269 aa	Predicted RBP	32.99	■■■□□ 2.87
SMIM12-205	ENST00000456842	TBC1D22A	Q8WUA7	517 aa		32.99	■■■□□ 2.87
SMIM12-205	ENST00000456842	COPRS	Q9NQ92	184 aa		32.99	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms