RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 TTLL5Q6EMB2 1281 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 USP17L1Q7RTZ2 530 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 CLASRPQ8N2M8 674 aaKnown RBP17.29■□□□□ 0.36
TIMP1-205ENST00000456754 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 ADAMTSL1Q8N6G6 1762 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 WDR90Q96KV7 1748 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
TIMP1-205ENST00000456754 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
TIMP1-205ENST00000456754 SCNN1DP51172 638 aa17.28■□□□□ 0.36
TIMP1-205ENST00000456754 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
TIMP1-205ENST00000456754 GPC2Q8N158 579 aa17.28■□□□□ 0.36
TIMP1-205ENST00000456754 RRAGCQ9HB90 399 aa17.28■□□□□ 0.36
TIMP1-205ENST00000456754 EPS15P42566 896 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 MCAMP43121 646 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 STRIP1Q5VSL9 837 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
TIMP1-205ENST00000456754 SKAP1Q86WV1 359 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 ZNF784Q8NCA9 323 aaPredicted RBP17.27■□□□□ 0.36
TIMP1-205ENST00000456754 GCC1Q96CN9 775 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 HMG20BQ9P0W2 317 aa17.27■□□□□ 0.36
TIMP1-205ENST00000456754 FAM205AQ6ZU69 1335 aa17.26■□□□□ 0.35
TIMP1-205ENST00000456754 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
TIMP1-205ENST00000456754 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
TIMP1-205ENST00000456754 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
TIMP1-205ENST00000456754 ARID4AP29374 1257 aaPredicted RBP17.26■□□□□ 0.35
TIMP1-205ENST00000456754 TNIP1Q15025 636 aa17.26■□□□□ 0.35
TIMP1-205ENST00000456754 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
TIMP1-205ENST00000456754 DPY19L2Q6NUT2 758 aa17.26■□□□□ 0.35
TIMP1-205ENST00000456754 GMLQ99445 158 aa17.26■□□□□ 0.35
TIMP1-205ENST00000456754 EGFRP00533 1210 aa17.25■□□□□ 0.35
TIMP1-205ENST00000456754 MFSD14BQ5SR56 506 aa17.25■□□□□ 0.35
TIMP1-205ENST00000456754 TBC1D9Q6ZT07 1266 aa17.25■□□□□ 0.35
TIMP1-205ENST00000456754 KIAA0825Q8IV33 1275 aa17.25■□□□□ 0.35
TIMP1-205ENST00000456754 PCDHAC2Q9Y5I4 1007 aa17.25■□□□□ 0.35
TIMP1-205ENST00000456754 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
TIMP1-205ENST00000456754 NUCB1Q02818 461 aa17.24■□□□□ 0.35
TIMP1-205ENST00000456754 MICALL2Q8IY33 904 aa17.24■□□□□ 0.35
TIMP1-205ENST00000456754 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
TIMP1-205ENST00000456754 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
TIMP1-205ENST00000456754 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
TIMP1-205ENST00000456754 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
TIMP1-205ENST00000456754 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 PDE4AP27815 886 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 ZAP70P43403 619 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 SPATA5Q8NB90 893 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 TRPM4Q8TD43 1214 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 CNOT7Q9UIV1 285 aaKnown RBP17.23■□□□□ 0.35
TIMP1-205ENST00000456754 SCN4AP35499 1836 aa17.23■□□□□ 0.35
TIMP1-205ENST00000456754 AOX1Q06278 1338 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 SALL3Q9BXA9 1300 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 PRDX5P30044 214 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 RBM26Q5T8P6 1007 aaKnown RBP17.22■□□□□ 0.35
TIMP1-205ENST00000456754 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 GPBP1L1Q9HC44 474 aaPredicted RBP17.22■□□□□ 0.35
TIMP1-205ENST00000456754 PIH1D3Q9NQM4 214 aaKnown RBP17.22■□□□□ 0.35
TIMP1-205ENST00000456754 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
TIMP1-205ENST00000456754 CYP2E1P05181 493 aaPredicted RBP17.21■□□□□ 0.35
TIMP1-205ENST00000456754 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
TIMP1-205ENST00000456754 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
TIMP1-205ENST00000456754 BOLA2Q9H3K6 86 aa17.21■□□□□ 0.35
TIMP1-205ENST00000456754 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
TIMP1-205ENST00000456754 KIF3CO14782 793 aa17.2■□□□□ 0.34
TIMP1-205ENST00000456754 SEMA3EO15041 775 aa17.2■□□□□ 0.34
TIMP1-205ENST00000456754 EPHX2P34913 555 aa17.2■□□□□ 0.34
TIMP1-205ENST00000456754 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
TIMP1-205ENST00000456754 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
TIMP1-205ENST00000456754 AGBL3Q8NEM8 1001 aa17.2■□□□□ 0.34
TIMP1-205ENST00000456754 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
TIMP1-205ENST00000456754 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
TIMP1-205ENST00000456754 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
TIMP1-205ENST00000456754 ABCF2Q9UG63 623 aa17.2■□□□□ 0.34
TIMP1-205ENST00000456754 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
TIMP1-205ENST00000456754 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
TIMP1-205ENST00000456754 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
TIMP1-205ENST00000456754 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
TIMP1-205ENST00000456754 LMOD1P29536 600 aaPredicted RBP17.19■□□□□ 0.34
TIMP1-205ENST00000456754 WDR66Q8TBY9 1149 aa17.19■□□□□ 0.34
TIMP1-205ENST00000456754 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
TIMP1-205ENST00000456754 DPF2Q92785 391 aa17.19■□□□□ 0.34
TIMP1-205ENST00000456754 ECHDC1Q9NTX5 307 aa17.19■□□□□ 0.34
TIMP1-205ENST00000456754 TTF2Q9UNY4 1162 aaKnown RBP17.19■□□□□ 0.34
TIMP1-205ENST00000456754 CHGBP05060 677 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 ATP5JP18859 108 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 MX1P20591 662 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 ZNF280AP59817 542 aaPredicted RBP17.18■□□□□ 0.34
TIMP1-205ENST00000456754 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
TIMP1-205ENST00000456754 DIXDC1Q155Q3 683 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 EAPPQ56P03 285 aaPredicted RBP17.18■□□□□ 0.34
TIMP1-205ENST00000456754 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 DOCK2Q92608 1830 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 PDS5AQ29RF7 1337 aaKnown RBP17.18■□□□□ 0.34
TIMP1-205ENST00000456754 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
TIMP1-205ENST00000456754 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms