RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	CNNM1	Q9NRU3	951 aa		12.4	□□□□□ -0.42
CHEK2-221	ENST00000456369	BOLA1	Q9Y3E2	137 aa		12.4	□□□□□ -0.42
CHEK2-221	ENST00000456369	WDR90	Q96KV7	1748 aa		12.4	□□□□□ -0.43
CHEK2-221	ENST00000456369	MROH5	Q6ZUA9	1318 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	EYA2	O00167	538 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	ECE2	O60344	883 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	RAD17	O75943	681 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	CIAO1	O76071	339 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	MS4A1	P11836	297 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	SCNN1D	P51172	638 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	PDE3A	Q14432	1141 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	MVP	Q14764	893 aa	Known RBP	12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	C20orf194	Q5TEA3	1177 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	CCDC136	Q96JN2	1154 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	COPRS	Q9NQ92	184 aa		12.39	□□□□□ -0.43
CHEK2-221	ENST00000456369	CCDC88A	Q3V6T2	1871 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	PNMA6E	A0A0J9YXQ4	647 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	SRGAP3	O43295	1099 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	TOMM70	O94826	608 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	PDE8B	O95263	885 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	POTEJ	P0CG39	1038 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	CIAPIN1	Q6FI81	312 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	PODN	Q7Z5L7	613 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	COA1	Q9GZY4	146 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	GJA3	Q9Y6H8	435 aa		12.38	□□□□□ -0.43
CHEK2-221	ENST00000456369	IQCA1L	A6NCM1	817 aa		12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	PSMD14	O00487	310 aa		12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	VIL1	P09327	827 aa	Known RBP	12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	UBE4A	Q14139	1066 aa		12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	TNIP1	Q15025	636 aa		12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	PA2G4	Q9UQ80	394 aa	Known RBP	12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	COG6	Q9Y2V7	657 aa		12.37	□□□□□ -0.43
CHEK2-221	ENST00000456369	FGFR2	P21802	821 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	EPS15	P42566	896 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	KCNJ4	P48050	445 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	GMPS	P49915	693 aa	Predicted RBP	12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	C1QTNF8	P60827	252 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	ATP8B2	P98198	1209 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	AAMP	Q13685	434 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	METTL24	Q5JXM2	366 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	B4GALNT3	Q6L9W6	998 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	RBM46	Q8TBY0	533 aa	Known RBP	12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	SSH3	Q8TE77	659 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	C1orf115	Q9H7X2	142 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	ZBTB40	Q9NUA8	1239 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	GPRC5D	Q9NZD1	345 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	HACL1	Q9UJ83	578 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	ZNF609	O15014	1411 aa		12.36	□□□□□ -0.43
CHEK2-221	ENST00000456369	SPEF2	Q9C093	1822 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	IL1R1	P14778	569 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	EPHX2	P34913	555 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	IL15	P40933	162 aa	Predicted RBP	12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	MAMSTR	Q6ZN01	415 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	EXOC6	Q8TAG9	804 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	DPF2	Q92785	391 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	FAM84B	Q96KN1	310 aa	Predicted RBP	12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	GML	Q99445	158 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	SIL1	Q9H173	461 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	CD209	Q9NNX6	404 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	DDX19B	Q9UMR2	479 aa		12.35	□□□□□ -0.43
CHEK2-221	ENST00000456369	USP17L3	A6NCW0	530 aa		12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	USP17L4	A6NCW7	530 aa		12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	RPS12	P25398	132 aa	Known RBP	12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	PUM3	Q15397	648 aa	Known RBP	12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	DACT2	Q5SW24	774 aa		12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	CEP85	Q6P2H3	762 aa		12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	USP17L1	Q7RTZ2	530 aa		12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	MICALL2	Q8IY33	904 aa		12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.34	□□□□□ -0.43
CHEK2-221	ENST00000456369	SHTN1	A0MZ66	631 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	GYG1	P46976	350 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	STRIP1	Q5VSL9	837 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	FBXO33	Q7Z6M2	555 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	PNMA8A	Q86V59	439 aa	Predicted RBP	12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	CRBN	Q96SW2	442 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	SCUBE2	Q9NQ36	999 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	CNOT7	Q9UIV1	285 aa	Known RBP	12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369		A0A1B0GUL6	1792 aa		12.33	□□□□□ -0.44
CHEK2-221	ENST00000456369	LMOD1	P29536	600 aa	Predicted RBP	12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	HIBADH	P31937	336 aa	Known RBP	12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	FSTL1	Q12841	308 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	ZNF804A	Q7Z570	1209 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	SIRT2	Q8IXJ6	389 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	AGBL3	Q8NEM8	1001 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	TDRD7	Q8NHU6	1098 aa	Known RBP	12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	LPIN2	Q92539	896 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	MXD3	Q9BW11	206 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	ADARB2	Q9NS39	739 aa	Known RBP	12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	CEP126	Q9P2H0	1117 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	NOP58	Q9Y2X3	529 aa	Known RBP	12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	SCN9A	Q15858	1988 aa		12.32	□□□□□ -0.44
CHEK2-221	ENST00000456369	SASH1	O94885	1247 aa		12.31	□□□□□ -0.44
CHEK2-221	ENST00000456369	EGFR	P00533	1210 aa		12.31	□□□□□ -0.44
CHEK2-221	ENST00000456369	HIRA	P54198	1017 aa	Predicted RBP	12.31	□□□□□ -0.44
CHEK2-221	ENST00000456369	ZNF280A	P59817	542 aa	Predicted RBP	12.31	□□□□□ -0.44
CHEK2-221	ENST00000456369	GTF2I	P78347	998 aa		12.31	□□□□□ -0.44
CHEK2-221	ENST00000456369	TTLL5	Q6EMB2	1281 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms