RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 SCAF8Q9UPN6 1271 aaKnown RBP17.4■□□□□ 0.38
LINC01563-201ENST00000456235 PCDHAC2Q9Y5I4 1007 aa17.4■□□□□ 0.38
LINC01563-201ENST00000456235 FRAT2O75474 233 aaPredicted RBP17.39■□□□□ 0.37
LINC01563-201ENST00000456235 HIRAP54198 1017 aaPredicted RBP17.39■□□□□ 0.37
LINC01563-201ENST00000456235 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.37
LINC01563-201ENST00000456235 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
LINC01563-201ENST00000456235 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.37
LINC01563-201ENST00000456235 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
LINC01563-201ENST00000456235 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC01563-201ENST00000456235 STRIP1Q5VSL9 837 aa17.38■□□□□ 0.37
LINC01563-201ENST00000456235 DLK2Q6UY11 383 aa17.38■□□□□ 0.37
LINC01563-201ENST00000456235 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
LINC01563-201ENST00000456235 XAGE2Q96GT9 111 aa17.38■□□□□ 0.37
LINC01563-201ENST00000456235 GMLQ99445 158 aa17.38■□□□□ 0.37
LINC01563-201ENST00000456235 ADARB2Q9NS39 739 aaKnown RBP17.38■□□□□ 0.37
LINC01563-201ENST00000456235 H7C1D1 291 aa17.37■□□□□ 0.37
LINC01563-201ENST00000456235 KIF4BQ2VIQ3 1234 aa17.37■□□□□ 0.37
LINC01563-201ENST00000456235 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
LINC01563-201ENST00000456235 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
LINC01563-201ENST00000456235 RBM46Q8TBY0 533 aaKnown RBP17.37■□□□□ 0.37
LINC01563-201ENST00000456235 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
LINC01563-201ENST00000456235 POLR2AP24928 1970 aaKnown RBP17.37■□□□□ 0.37
LINC01563-201ENST00000456235 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
LINC01563-201ENST00000456235 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
LINC01563-201ENST00000456235 USP17L8P0C7I0 530 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 RPS12P25398 132 aaKnown RBP17.36■□□□□ 0.37
LINC01563-201ENST00000456235 HTRA3P83110 453 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 MFSD14BQ5SR56 506 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 CCDC102BQ68D86 513 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 CHADLQ6NUI6 762 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 PI16Q6UXB8 463 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 SMC1BQ8NDV3 1235 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
LINC01563-201ENST00000456235 CCDC8Q9H0W5 538 aaPredicted RBP17.36■□□□□ 0.37
LINC01563-201ENST00000456235 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
LINC01563-201ENST00000456235 HMMRO75330 724 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 DPF2Q92785 391 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
LINC01563-201ENST00000456235 MYOZ2Q9NPC6 264 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 AOX1Q06278 1338 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 ECM29Q5VYK3 1845 aa17.35■□□□□ 0.37
LINC01563-201ENST00000456235 TRAF5O00463 557 aa17.34■□□□□ 0.37
LINC01563-201ENST00000456235 SCARF1Q14162 830 aa17.34■□□□□ 0.37
LINC01563-201ENST00000456235 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
LINC01563-201ENST00000456235 USP50Q70EL3 339 aaPredicted RBP17.34■□□□□ 0.37
LINC01563-201ENST00000456235 PNMA8AQ86V59 439 aaPredicted RBP17.34■□□□□ 0.37
LINC01563-201ENST00000456235 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
LINC01563-201ENST00000456235 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
LINC01563-201ENST00000456235 FAM205AQ6ZU69 1335 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 ZNF280AP59817 542 aaPredicted RBP17.33■□□□□ 0.36
LINC01563-201ENST00000456235 RASGRF1Q13972 1273 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 NBPF9Q3BBW0 867 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 AACSQ86V21 672 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 RHPN1Q8TCX5 695 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
LINC01563-201ENST00000456235 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.36
LINC01563-201ENST00000456235 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.36
LINC01563-201ENST00000456235 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
LINC01563-201ENST00000456235 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
LINC01563-201ENST00000456235 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
LINC01563-201ENST00000456235 GGA3Q9NZ52 723 aa17.32■□□□□ 0.36
LINC01563-201ENST00000456235 TTF2Q9UNY4 1162 aaKnown RBP17.32■□□□□ 0.36
LINC01563-201ENST00000456235 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC01563-201ENST00000456235 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
LINC01563-201ENST00000456235 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
LINC01563-201ENST00000456235 MCAMP43121 646 aa17.3■□□□□ 0.36
LINC01563-201ENST00000456235 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
LINC01563-201ENST00000456235 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
LINC01563-201ENST00000456235 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
LINC01563-201ENST00000456235 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
LINC01563-201ENST00000456235 TRPM7Q96QT4 1865 aa17.3■□□□□ 0.36
LINC01563-201ENST00000456235 MAST2Q6P0Q8 1798 aa17.3■□□□□ 0.36
LINC01563-201ENST00000456235 MYH2Q9UKX2 1941 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 PRDX5P30044 214 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 FSTL1Q12841 308 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 USP48Q86UV5 1035 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 ERC1Q8IUD2 1116 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 ZNF408Q9H9D4 720 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 HMG20BQ9P0W2 317 aa17.29■□□□□ 0.36
LINC01563-201ENST00000456235 ITGBL1O95965 494 aaPredicted RBP17.28■□□□□ 0.36
LINC01563-201ENST00000456235 DIXDC1Q155Q3 683 aa17.28■□□□□ 0.36
LINC01563-201ENST00000456235 KIF1BPQ96EK5 621 aa17.28■□□□□ 0.36
LINC01563-201ENST00000456235 HDAC9Q9UKV0 1011 aa17.28■□□□□ 0.36
LINC01563-201ENST00000456235 DENND2AQ9ULE3 1009 aa17.28■□□□□ 0.36
LINC01563-201ENST00000456235 WNT10BO00744 389 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 ARID4AP29374 1257 aaPredicted RBP17.27■□□□□ 0.36
LINC01563-201ENST00000456235 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 TSHZ3Q63HK5 1081 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 SPATA5Q8NB90 893 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 GPR108Q9NPR9 543 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 ABCF2Q9UG63 623 aa17.27■□□□□ 0.36
LINC01563-201ENST00000456235 PASKQ96RG2 1323 aa17.26■□□□□ 0.35
LINC01563-201ENST00000456235 HSPA6P17066 643 aa17.26■□□□□ 0.35
LINC01563-201ENST00000456235 CRKP46108 304 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms