RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 ZNF804AQ7Z570 1209 aa27.46■■□□□ 1.99
SEC22C-213ENST00000456222 PTPRCP08575 1304 aa27.45■■□□□ 1.99
SEC22C-213ENST00000456222 F8W031 263 aaPredicted RBP27.45■■□□□ 1.98
SEC22C-213ENST00000456222 FKBP1BP68106 108 aa27.45■■□□□ 1.98
SEC22C-213ENST00000456222 RABL6Q3YEC7 729 aaPredicted RBP27.45■■□□□ 1.98
SEC22C-213ENST00000456222 CSRNP1Q96S65 589 aa27.45■■□□□ 1.98
SEC22C-213ENST00000456222 HDAC9Q9UKV0 1011 aa27.45■■□□□ 1.98
SEC22C-213ENST00000456222 RIPOR2Q9Y4F9 1068 aa27.45■■□□□ 1.98
SEC22C-213ENST00000456222 ECM29Q5VYK3 1845 aa27.45■■□□□ 1.98
SEC22C-213ENST00000456222 GYG1P46976 350 aa27.43■■□□□ 1.98
SEC22C-213ENST00000456222 MMP14P50281 582 aa27.43■■□□□ 1.98
SEC22C-213ENST00000456222 TRMT2AQ8IZ69 625 aaKnown RBP27.43■■□□□ 1.98
SEC22C-213ENST00000456222 USP44Q9H0E7 712 aa27.43■■□□□ 1.98
SEC22C-213ENST00000456222 LRRC24Q50LG9 513 aa27.42■■□□□ 1.98
SEC22C-213ENST00000456222 RNF186Q9NXI6 227 aa27.42■■□□□ 1.98
SEC22C-213ENST00000456222 UBE4AQ14139 1066 aa27.41■■□□□ 1.98
SEC22C-213ENST00000456222 DLGAP5Q15398 846 aa27.41■■□□□ 1.98
SEC22C-213ENST00000456222 APOBEC3FQ8IUX4 373 aaKnown RBP27.41■■□□□ 1.98
SEC22C-213ENST00000456222 KLHDC4Q8TBB5 520 aa27.41■■□□□ 1.98
SEC22C-213ENST00000456222 FAM84BQ96KN1 310 aaPredicted RBP27.41■■□□□ 1.98
SEC22C-213ENST00000456222 FZD1Q9UP38 647 aa27.41■■□□□ 1.98
SEC22C-213ENST00000456222 TRPA1O75762 1119 aa27.4■■□□□ 1.98
SEC22C-213ENST00000456222 TTLL12Q14166 644 aaPredicted RBP27.4■■□□□ 1.98
SEC22C-213ENST00000456222 MTMR14Q8NCE2 650 aa27.4■■□□□ 1.98
SEC22C-213ENST00000456222 TDRD7Q8NHU6 1098 aaKnown RBP27.4■■□□□ 1.98
SEC22C-213ENST00000456222 FKBP1AP62942 108 aaKnown RBP27.39■■□□□ 1.98
SEC22C-213ENST00000456222 PRKG1Q13976 671 aa27.39■■□□□ 1.98
SEC22C-213ENST00000456222 CFAP100Q494V2 611 aa27.39■■□□□ 1.98
SEC22C-213ENST00000456222 PRMT6Q96LA8 375 aaPredicted RBP27.39■■□□□ 1.98
SEC22C-213ENST00000456222 FAM205AQ6ZU69 1335 aa27.39■■□□□ 1.97
SEC22C-213ENST00000456222 CLRN2A0PK11 232 aa27.38■■□□□ 1.97
SEC22C-213ENST00000456222 ALDH1L2Q3SY69 923 aa27.38■■□□□ 1.97
SEC22C-213ENST00000456222 SMC4Q9NTJ3 1288 aa27.38■■□□□ 1.97
SEC22C-213ENST00000456222 SAGE1Q9NXZ1 904 aa27.38■■□□□ 1.97
SEC22C-213ENST00000456222 SSC5DA1L4H1 1573 aa27.38■■□□□ 1.97
SEC22C-213ENST00000456222 ARAP2Q8WZ64 1704 aa27.38■■□□□ 1.97
SEC22C-213ENST00000456222 SPDYE2BA6NHP3 402 aa27.37■■□□□ 1.97
SEC22C-213ENST00000456222 SPDYE6P0CI01 402 aa27.37■■□□□ 1.97
SEC22C-213ENST00000456222 HIBADHP31937 336 aaKnown RBP27.37■■□□□ 1.97
SEC22C-213ENST00000456222 VGLL2Q8N8G2 317 aa27.37■■□□□ 1.97
SEC22C-213ENST00000456222 MCOLN1Q9GZU1 580 aa27.37■■□□□ 1.97
SEC22C-213ENST00000456222 DEFB129Q9H1M3 183 aa27.37■■□□□ 1.97
SEC22C-213ENST00000456222 MROH5Q6ZUA9 1318 aa27.37■■□□□ 1.97
SEC22C-213ENST00000456222 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
SEC22C-213ENST00000456222 NF2P35240 595 aa27.35■■□□□ 1.97
SEC22C-213ENST00000456222 MKRN3Q13064 507 aaKnown RBP27.35■■□□□ 1.97
SEC22C-213ENST00000456222 GRIK5Q16478 980 aa27.35■■□□□ 1.97
SEC22C-213ENST00000456222 IQSEC3Q9UPP2 1182 aaPredicted RBP27.35■■□□□ 1.97
SEC22C-213ENST00000456222 METTL24Q5JXM2 366 aa27.34■■□□□ 1.97
SEC22C-213ENST00000456222 MFSD14BQ5SR56 506 aa27.34■■□□□ 1.97
SEC22C-213ENST00000456222 FBXO33Q7Z6M2 555 aa27.34■■□□□ 1.97
SEC22C-213ENST00000456222 COL1A1P02452 1464 aaPredicted RBP27.33■■□□□ 1.97
SEC22C-213ENST00000456222 DGKZQ13574 1117 aa27.33■■□□□ 1.97
SEC22C-213ENST00000456222 CCER2I3L3R5 266 aa27.32■■□□□ 1.96
SEC22C-213ENST00000456222 RFX5P48382 616 aaPredicted RBP27.32■■□□□ 1.96
SEC22C-213ENST00000456222 LDLRAD1Q5T700 205 aa27.32■■□□□ 1.96
SEC22C-213ENST00000456222 ANGEL1Q9UNK9 670 aaKnown RBP27.32■■□□□ 1.96
SEC22C-213ENST00000456222 TTF2Q9UNY4 1162 aaKnown RBP27.32■■□□□ 1.96
SEC22C-213ENST00000456222 CCDC85CA6NKD9 419 aa27.31■■□□□ 1.96
SEC22C-213ENST00000456222 PDE8BO95263 885 aa27.31■■□□□ 1.96
SEC22C-213ENST00000456222 RBM5P52756 815 aaKnown RBP eCLIP27.31■■□□□ 1.96
SEC22C-213ENST00000456222 VEZTQ9HBM0 779 aa27.31■■□□□ 1.96
SEC22C-213ENST00000456222 NOB1Q9ULX3 412 aaKnown RBP27.31■■□□□ 1.96
SEC22C-213ENST00000456222 ARMC9Q7Z3E5 817 aa27.3■■□□□ 1.96
SEC22C-213ENST00000456222 NBPF12Q5TAG4 269 aaPredicted RBP27.29■■□□□ 1.96
SEC22C-213ENST00000456222 MYO1BO43795 1136 aa27.28■■□□□ 1.96
SEC22C-213ENST00000456222 FGFR2P21802 821 aa27.28■■□□□ 1.96
SEC22C-213ENST00000456222 BCAMP50895 628 aa27.28■■□□□ 1.96
SEC22C-213ENST00000456222 CHAF1AQ13111 956 aaPredicted RBP27.28■■□□□ 1.96
SEC22C-213ENST00000456222 REM2Q8IYK8 340 aaPredicted RBP27.28■■□□□ 1.96
SEC22C-213ENST00000456222 CLMNQ96JQ2 1002 aa27.28■■□□□ 1.96
SEC22C-213ENST00000456222 RASA3Q14644 834 aa27.27■■□□□ 1.96
SEC22C-213ENST00000456222 CDAN1Q8IWY9 1227 aa27.27■■□□□ 1.96
SEC22C-213ENST00000456222 TDRD3Q9H7E2 651 aaKnown RBP27.27■■□□□ 1.96
SEC22C-213ENST00000456222 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.27■■□□□ 1.96
SEC22C-213ENST00000456222 ZNF70Q9UC06 446 aaPredicted RBP27.27■■□□□ 1.96
SEC22C-213ENST00000456222 SERPINA10Q9UK55 444 aa27.27■■□□□ 1.96
SEC22C-213ENST00000456222 PPP2R3BQ9Y5P8 575 aa27.27■■□□□ 1.96
SEC22C-213ENST00000456222 TM4SF4P48230 202 aa27.26■■□□□ 1.95
SEC22C-213ENST00000456222 SPDYE2Q495Y8 402 aa27.26■■□□□ 1.95
SEC22C-213ENST00000456222 VPS37DQ86XT2 251 aa27.26■■□□□ 1.95
SEC22C-213ENST00000456222 OTOFQ9HC10 1997 aa27.26■■□□□ 1.95
SEC22C-213ENST00000456222 EYA2O00167 538 aa27.25■■□□□ 1.95
SEC22C-213ENST00000456222 TBC1D8O95759 1140 aa27.25■■□□□ 1.95
SEC22C-213ENST00000456222 CT47B1P0C2W7 299 aaPredicted RBP27.25■■□□□ 1.95
SEC22C-213ENST00000456222 CRKP46108 304 aa27.25■■□□□ 1.95
SEC22C-213ENST00000456222 MAP3K11Q16584 847 aa27.25■■□□□ 1.95
SEC22C-213ENST00000456222 SPRYD7Q5W111 196 aa27.25■■□□□ 1.95
SEC22C-213ENST00000456222 ATG9AQ7Z3C6 839 aa27.25■■□□□ 1.95
SEC22C-213ENST00000456222 DZIP1LQ8IYY4 767 aaKnown RBP27.25■■□□□ 1.95
SEC22C-213ENST00000456222 MYH13Q9UKX3 1938 aa27.24■■□□□ 1.95
SEC22C-213ENST00000456222 RARSP54136 660 aaKnown RBP27.24■■□□□ 1.95
SEC22C-213ENST00000456222 PUM3Q15397 648 aaKnown RBP27.24■■□□□ 1.95
SEC22C-213ENST00000456222 CAVIN4Q5BKX8 364 aa27.24■■□□□ 1.95
SEC22C-213ENST00000456222 UBTFL1P0CB47 393 aaPredicted RBP27.23■■□□□ 1.95
SEC22C-213ENST00000456222 TEPSINQ96N21 525 aa27.22■■□□□ 1.95
SEC22C-213ENST00000456222 SIL1Q9H173 461 aa27.22■■□□□ 1.95
SEC22C-213ENST00000456222 R3HDMLQ9H3Y0 253 aa27.22■■□□□ 1.95
SEC22C-213ENST00000456222 LAMB1P07942 1786 aa27.22■■□□□ 1.95
SEC22C-213ENST00000456222 PPP1R12BO60237 982 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms