RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 TYRO3Q06418 890 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 MICAL1Q8TDZ2 1067 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 C16orf45Q96MC5 204 aaPredicted RBP11.12□□□□□ -0.63
LINC01940-201ENST00000455228 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 ST5P78524 1137 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 ARMC2Q8NEN0 867 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
LINC01940-201ENST00000455228 TRIM6Q9C030 488 aaPredicted RBP11.12□□□□□ -0.63
LINC01940-201ENST00000455228 RIMBP3CA6NJZ7 1639 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 RIMBP3BA6NNM3 1639 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 RIMBP3Q9UFD9 1639 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 C3P01024 1663 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 POLA2Q14181 598 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 ME3Q16798 604 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 FAM173BQ6P4H8 233 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC01940-201ENST00000455228 RICTORQ6R327 1708 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 USP6P35125 1406 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
LINC01940-201ENST00000455228 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 PI4KAP2A4QPH2 592 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 NLRP6P59044 892 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 NYAP1Q6ZVC0 841 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 TTC6Q86TZ1 520 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 PI4KAP1Q8N8J0 262 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 SPATA32Q96LK8 384 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 DACT1Q9NYF0 836 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 PSMA5P28066 241 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 RAB27AP51159 221 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 ANO6Q4KMQ2 910 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 BICD2Q8TD16 824 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 THOC1Q96FV9 657 aaKnown RBP11.11□□□□□ -0.63
LINC01940-201ENST00000455228 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
LINC01940-201ENST00000455228 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
LINC01940-201ENST00000455228 IGSF1Q8N6C5 1336 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 MCM6Q14566 821 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 MICALL1Q8N3F8 863 aa11.11□□□□□ -0.63
LINC01940-201ENST00000455228 SCAND2PQ9GZW5 306 aaPredicted RBP11.11□□□□□ -0.63
LINC01940-201ENST00000455228 SPATS2LQ9NUQ6 558 aaKnown RBP11.11□□□□□ -0.63
LINC01940-201ENST00000455228 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 CCDC178Q5BJE1 867 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 SDCCAG8Q86SQ7 713 aaPredicted RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 TM6SF1Q9BZW5 370 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 RBM8AQ9Y5S9 174 aaKnown RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 MAP3K5Q99683 1374 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 FILIP1LQ4L180 1135 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 ANKRD18AQ8IVF6 992 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 AK7Q96M32 723 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 ABCF2Q9UG63 623 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 USP31Q70CQ4 1352 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 HNRNPH1P31943 449 aaKnown RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 STK3Q13188 491 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 RBBP5Q15291 538 aaKnown RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 ZRSR1Q15695 479 aaKnown RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
LINC01940-201ENST00000455228 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 AACSQ86V21 672 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 MAB21L3Q8N8X9 362 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
LINC01940-201ENST00000455228 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 LRMPQ12912 555 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 TMED1Q13445 227 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
LINC01940-201ENST00000455228 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 MAGEC3Q8TD91 643 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 EVI5LQ96CN4 794 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 CBX8Q9HC52 389 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 CHPF2Q9P2E5 772 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 NAT1P18440 290 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
LINC01940-201ENST00000455228 ANKRD1Q15327 319 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 CREB3L3Q68CJ9 461 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
LINC01940-201ENST00000455228 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 AKAP12Q02952 1782 aa11.09□□□□□ -0.63
LINC01940-201ENST00000455228 GOLGA6L19H0YKK7 550 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 ANXA1P04083 346 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 ZNF165P49910 485 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 ATL2Q8NHH9 583 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 TBC1D5Q92609 795 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 KAT2BQ92831 832 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
LINC01940-201ENST00000455228 TLDC1Q6P9B6 456 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 HIP1O00291 1037 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms