RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 PNMA8AQ86V59 439 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-205ENST00000454964 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
ATXN3-205ENST00000454964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.61□□□□□ -0.55
ATXN3-205ENST00000454964 YY1P25490 414 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 CXCL9Q07325 125 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-205ENST00000454964 TTF1Q15361 905 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-205ENST00000454964 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-205ENST00000454964 AACSQ86V21 672 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-205ENST00000454964 DBNDD1Q9H9R9 158 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 ZNF609O15014 1411 aa11.6□□□□□ -0.55
ATXN3-205ENST00000454964 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 ARID4AP29374 1257 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-205ENST00000454964 BCAMP50895 628 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
ATXN3-205ENST00000454964 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-205ENST00000454964 CERS3Q8IU89 383 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-205ENST00000454964 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 ARAP2Q8WZ64 1704 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 TTC41PQ6P2S7 1318 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 SALL1Q9NSC2 1324 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 IRS2Q9Y4H2 1338 aa11.59□□□□□ -0.55
ATXN3-205ENST00000454964 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-205ENST00000454964 LDHCP07864 332 aa11.58□□□□□ -0.56
ATXN3-205ENST00000454964 GYG1P46976 350 aa11.58□□□□□ -0.56
ATXN3-205ENST00000454964 GTF2IP78347 998 aa11.58□□□□□ -0.56
ATXN3-205ENST00000454964 EAF2Q96CJ1 260 aaPredicted RBP11.58□□□□□ -0.56
ATXN3-205ENST00000454964 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
ATXN3-205ENST00000454964 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
ATXN3-205ENST00000454964 PSMD14O00487 310 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 USP17L8P0C7I0 530 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 ATP5JP18859 108 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 GSTO1P78417 241 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 NUCB1Q02818 461 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
ATXN3-205ENST00000454964 TXNRD3Q86VQ6 643 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
ATXN3-205ENST00000454964 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
ATXN3-205ENST00000454964 IL1RAPL2Q9NP60 686 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 ECHDC1Q9NTX5 307 aa11.57□□□□□ -0.56
ATXN3-205ENST00000454964 COL4A1P02462 1669 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 APBB1O00213 710 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 MYO1BO43795 1136 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 RAD17O75943 681 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 GLRX3O76003 335 aaKnown RBP11.56□□□□□ -0.56
ATXN3-205ENST00000454964 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
ATXN3-205ENST00000454964 MFSD14BQ5SR56 506 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 DACT2Q5SW24 774 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 CHD1LQ86WJ1 897 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 SPATA5Q8NB90 893 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
ATXN3-205ENST00000454964 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
ATXN3-205ENST00000454964 AOX1Q06278 1338 aa11.56□□□□□ -0.56
ATXN3-205ENST00000454964 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 DDNO94850 711 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-205ENST00000454964 LDHBP07195 334 aaKnown RBP11.55□□□□□ -0.56
ATXN3-205ENST00000454964 PHKA1P46020 1223 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 PRELPP51888 382 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 DBNDD2Q9BQY9 259 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.55□□□□□ -0.56
ATXN3-205ENST00000454964 CCDC8Q9H0W5 538 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-205ENST00000454964 GPRC5DQ9NZD1 345 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
ATXN3-205ENST00000454964 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
ATXN3-205ENST00000454964 SCN9AQ15858 1988 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 SNAP23O00161 211 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 IGHDP01880 384 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
ATXN3-205ENST00000454964 MAP3K12Q12852 859 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
ATXN3-205ENST00000454964 GMLQ99445 158 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
ATXN3-205ENST00000454964 LRP2BPQ9P2M1 347 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 STAP2Q9UGK3 403 aa11.54□□□□□ -0.56
ATXN3-205ENST00000454964 PLCG2P16885 1265 aa11.53□□□□□ -0.56
ATXN3-205ENST00000454964 MX1P20591 662 aa11.53□□□□□ -0.56
ATXN3-205ENST00000454964 ZNF280AP59817 542 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-205ENST00000454964 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-205ENST00000454964 TEKT1Q969V4 418 aa11.53□□□□□ -0.56
ATXN3-205ENST00000454964 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-205ENST00000454964 OSBPL3Q9H4L5 887 aa11.53□□□□□ -0.56
ATXN3-205ENST00000454964 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-205ENST00000454964 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
ATXN3-205ENST00000454964 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
ATXN3-205ENST00000454964 BAG3O95817 575 aa11.52□□□□□ -0.57
ATXN3-205ENST00000454964 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms