RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MYO1BO43795 1136 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 INHBEP58166 350 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 FLIIQ13045 1269 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 DNAAF4Q8WXU2 420 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 TSR2Q969E8 191 aaKnown RBP10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 CFHR5Q9BXR6 569 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 PCDH10Q9P2E7 1040 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 PPP2R3BQ9Y5P8 575 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 SASH1O94885 1247 aa10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 CSF1RP07333 972 aa10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 DLGAP5Q15398 846 aa10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 C15orf52Q6ZUT6 534 aaKnown RBP10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
NIF3L1-209ENST00000454952 MANSC4A6NHS7 340 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 GPR25O00155 361 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 PPP1R12BO60237 982 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 NUBP1P53384 320 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 SOX10P56693 466 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 FKBP1AP62942 108 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 GTF2IP78347 998 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 CHRNDQ07001 517 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 IFIT5Q13325 482 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 SUPT20HL1Q3ZLR7 823 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 FBXO46Q6PJ61 603 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 MOB2Q70IA6 237 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 ZNF804AQ7Z570 1209 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 TXNRD3Q86VQ6 643 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 MXD3Q9BW11 206 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 CD209Q9NNX6 404 aa10.2□□□□□ -0.78
NIF3L1-209ENST00000454952 WTIPA6NIX2 430 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 FKTNO75072 461 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 TBC1D8O95759 1140 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 ZBTB48P10074 688 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 CASP7P55210 303 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 PTPN12Q05209 780 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 PRAMEF18Q5VWM3 479 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 G2E3Q7L622 706 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 WDR63Q8IWG1 891 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 ZBED3Q96IU2 234 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 DEFB129Q9H1M3 183 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 ANGEL1Q9UNK9 670 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 LAMB1P07942 1786 aa10.19□□□□□ -0.78
NIF3L1-209ENST00000454952 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 IL1R1P14778 569 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 TNFAIP1Q13829 316 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 PRPF38BQ5VTL8 546 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 OTUD7BQ6GQQ9 843 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 SCAF8Q9UPN6 1271 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 A0A1B0GUL6 1792 aa10.18□□□□□ -0.78
NIF3L1-209ENST00000454952 PRKAR2AP13861 404 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-209ENST00000454952 KLRK1P26718 216 aa10.17□□□□□ -0.78
NIF3L1-209ENST00000454952 IREB2P48200 963 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-209ENST00000454952 MKRN3Q13064 507 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-209ENST00000454952 LHX8Q68G74 356 aa10.17□□□□□ -0.78
NIF3L1-209ENST00000454952 VAMP4O75379 141 aa10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 PRKG1Q13976 671 aa10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 CFAP100Q494V2 611 aa10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 INTS3Q68E01 1043 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 LDHAL6AQ6ZMR3 332 aa10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 IFNL1Q8IU54 200 aa10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
NIF3L1-209ENST00000454952 IRS2Q9Y4H2 1338 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 GRM8O00222 908 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 TAF5LO75529 589 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 RBM5P52756 815 aaKnown RBP eCLIP10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 FOXO4P98177 505 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 ARHGEF6Q15052 776 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 BEND3Q5T5X7 828 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 ANKRD13AQ8IZ07 590 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 CERS5Q8N5B7 392 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 ERO1AQ96HE7 468 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 WNK4Q96J92 1243 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 VEZTQ9HBM0 779 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 C9orf78Q9NZ63 289 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-209ENST00000454952 FAM205AQ6ZU69 1335 aa10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 F8W031 263 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 ALDH1L1O75891 902 aa10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 UBE4AQ14139 1066 aa10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 LMBR1LQ6UX01 489 aa10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 GCC1Q96CN9 775 aa10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
NIF3L1-209ENST00000454952 ARAP2Q8WZ64 1704 aa10.13□□□□□ -0.79
NIF3L1-209ENST00000454952 CLRN2A0PK11 232 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms