RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CNKSR2Q8WXI2 1034 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ZNF594Q96JF6 807 aaPredicted RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 COA1Q9GZY4 146 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SPINK5Q9NQ38 1064 aaPredicted RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 MYO3BQ8WXR4 1341 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 RBBP6Q7Z6E9 1792 aaKnown RBP7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PLIN1O60240 522 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SLC4A2P04920 1241 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SREBF2Q12772 1141 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GRIK5Q16478 980 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 LDLRAD1Q5T700 205 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CD99L2Q8TCZ2 262 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 WNK4Q96J92 1243 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 MPHOSPH8Q99549 860 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 DEFB129Q9H1M3 183 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 TRIM17Q9Y577 477 aa7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 COL1A1P02452 1464 aaPredicted RBP7.67□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SPDYE2BA6NHP3 402 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FKTNO75072 461 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SPDYE6P0CI01 402 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 TM4SF4P48230 202 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 RBM5P52756 815 aaKnown RBP eCLIP7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FOXO4P98177 505 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CRHR2Q13324 411 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 DLGAP5Q15398 846 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CFAP100Q494V2 611 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 NBPF12Q5TAG4 269 aaPredicted RBP7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FBXO46Q6PJ61 603 aaPredicted RBP7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 OTOP1Q7RTM1 612 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ARMC9Q7Z3E5 817 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 DNAAF4Q8WXU2 420 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CD209Q9NNX6 404 aa7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 IQSEC3Q9UPP2 1182 aaPredicted RBP7.66□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ANKRD18BA2A2Z9 1011 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CSF1RP07333 972 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GYG1P46976 350 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CACNB3P54284 484 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 IFNL1Q8IU54 200 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PRMT6Q96LA8 375 aaPredicted RBP7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PTPN18Q99952 460 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PLA2G12BQ9BX93 195 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ELP3Q9H9T3 547 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
HLA-DPA3-207ENST00000454398 LAMA3Q16787 3333 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 EXOSC9Q06265 439 aaKnown RBP7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 IFIT5Q13325 482 aaKnown RBP7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 RASA3Q14644 834 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 LMBR1LQ6UX01 489 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ZNF804AQ7Z570 1209 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 LINS1Q8NG48 757 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 KAZALD1Q96I82 304 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PUS3Q9BZE2 481 aaKnown RBP7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TMEM39BQ9GZU3 492 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ANKRD2Q9GZV1 360 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MYH16Q9H6N6 1097 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CACNA1FO60840 1977 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MYH13Q9UKX3 1938 aa7.64□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TCP10L2B9ZVM9 353 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CHAF1AQ13111 956 aaPredicted RBP7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 VGLL4Q14135 290 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PKN2Q16513 984 aaKnown RBP7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TAF7LQ5H9L4 462 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MFSD14BQ5SR56 506 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SLC4A10Q6U841 1118 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 REM2Q8IYK8 340 aaPredicted RBP7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 OPTNQ96CV9 577 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SLC10A4Q96EP9 437 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 OTUD5Q96G74 571 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CFHR5Q9BXR6 569 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TDRD3Q9H7E2 651 aaKnown RBP7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CNNM1Q9NRU3 951 aa7.63□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MANSC4A6NHS7 340 aaPredicted RBP7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 GRM8O00222 908 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 VAMP4O75379 141 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 USP2O75604 605 aaPredicted RBP7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 IL1R1P14778 569 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 EN2P19622 333 aaPredicted RBP7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MAP3K11Q16584 847 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SPDYE2Q495Y8 402 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 BEND3Q5T5X7 828 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 FAM43AQ8N2R8 423 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 KLHDC4Q8TBB5 520 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 BRI3BPQ8WY22 251 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SUCLG2Q96I99 432 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TEPSINQ96N21 525 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ARHGAP39Q9C0H5 1083 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MRS2Q9HD23 443 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TTF2Q9UNY4 1162 aaKnown RBP7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PTCH2Q9Y6C5 1203 aa7.62□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CCL15-CCL14A0A0B4J2E2 113 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MYO1BO43795 1136 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PPP1R12BO60237 982 aaPredicted RBP7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ZBTB48P10074 688 aaPredicted RBP7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CTGFP29279 349 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 IREB2P48200 963 aaKnown RBP7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CCL15Q16663 113 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CCDC57Q2TAC2 916 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 NOM1Q5C9Z4 860 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms