RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ANP32CO43423 234 aa30.11■■■□□ 2.41
LYSMD2-202ENST00000454181 PPP1R12BO60237 982 aaPredicted RBP30.11■■■□□ 2.41
LYSMD2-202ENST00000454181 PLIN1O60240 522 aa30.11■■■□□ 2.41
LYSMD2-202ENST00000454181 BEND3Q5T5X7 828 aa30.11■■■□□ 2.41
LYSMD2-202ENST00000454181 LDLRAD1Q5T700 205 aa30.11■■■□□ 2.41
LYSMD2-202ENST00000454181 CNNM1Q9NRU3 951 aa30.11■■■□□ 2.41
LYSMD2-202ENST00000454181 IL1R1P14778 569 aa30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 NOM1Q5C9Z4 860 aaKnown RBP30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 SPRYD7Q5W111 196 aa30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 LDHAL6AQ6ZMR3 332 aa30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 CERS5Q8N5B7 392 aa30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 MTMR14Q8NCE2 650 aa30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 C9orf78Q9NZ63 289 aaPredicted RBP30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 PPP2R3BQ9Y5P8 575 aa30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 COL1A1P02452 1464 aaPredicted RBP30.1■■■□□ 2.41
LYSMD2-202ENST00000454181 ALDH1A1P00352 501 aa30.09■■■□□ 2.41
LYSMD2-202ENST00000454181 RBM5P52756 815 aaKnown RBP eCLIP30.09■■■□□ 2.41
LYSMD2-202ENST00000454181 SUPT20HL1Q3ZLR7 823 aa30.09■■■□□ 2.41
LYSMD2-202ENST00000454181 CFAP100Q494V2 611 aa30.09■■■□□ 2.41
LYSMD2-202ENST00000454181 ZNF646O15015 1829 aaPredicted RBP30.08■■■□□ 2.41
LYSMD2-202ENST00000454181 GRM8O00222 908 aa30.08■■■□□ 2.41
LYSMD2-202ENST00000454181 FKTNO75072 461 aa30.08■■■□□ 2.41
LYSMD2-202ENST00000454181 FKBP1AP62942 108 aaKnown RBP30.08■■■□□ 2.41
LYSMD2-202ENST00000454181 VEZTQ9HBM0 779 aa30.08■■■□□ 2.41
LYSMD2-202ENST00000454181 CACNA1FO60840 1977 aa30.08■■■□□ 2.41
LYSMD2-202ENST00000454181 IRS2Q9Y4H2 1338 aa30.07■■■□□ 2.4
LYSMD2-202ENST00000454181 MANSC4A6NHS7 340 aaPredicted RBP30.07■■■□□ 2.4
LYSMD2-202ENST00000454181 INHBEP58166 350 aa30.07■■■□□ 2.4
LYSMD2-202ENST00000454181 ZNF594Q96JF6 807 aaPredicted RBP30.07■■■□□ 2.4
LYSMD2-202ENST00000454181 CLRN2A0PK11 232 aa30.06■■■□□ 2.4
LYSMD2-202ENST00000454181 FZD1Q9UP38 647 aa30.06■■■□□ 2.4
LYSMD2-202ENST00000454181 JAG2Q9Y219 1238 aa30.06■■■□□ 2.4
LYSMD2-202ENST00000454181 SPDYE2BA6NHP3 402 aa30.05■■■□□ 2.4
LYSMD2-202ENST00000454181 SPDYE6P0CI01 402 aa30.05■■■□□ 2.4
LYSMD2-202ENST00000454181 SLC4A10Q6U841 1118 aa30.05■■■□□ 2.4
LYSMD2-202ENST00000454181 CFHR5Q9BXR6 569 aa30.05■■■□□ 2.4
LYSMD2-202ENST00000454181 EPHA10Q5JZY3 1008 aa30.04■■■□□ 2.4
LYSMD2-202ENST00000454181 FBXO46Q6PJ61 603 aaPredicted RBP30.04■■■□□ 2.4
LYSMD2-202ENST00000454181 PRMT6Q96LA8 375 aaPredicted RBP30.04■■■□□ 2.4
LYSMD2-202ENST00000454181 PCDHAC2Q9Y5I4 1007 aa30.04■■■□□ 2.4
LYSMD2-202ENST00000454181 MAP3K11Q16584 847 aa30.03■■■□□ 2.4
LYSMD2-202ENST00000454181 UNCXA6NJT0 531 aa30.02■■■□□ 2.4
LYSMD2-202ENST00000454181 ALDH1L1O75891 902 aa30.02■■■□□ 2.4
LYSMD2-202ENST00000454181 ZBTB48P10074 688 aaPredicted RBP30.02■■■□□ 2.4
LYSMD2-202ENST00000454181 IREB2P48200 963 aaKnown RBP30.02■■■□□ 2.4
LYSMD2-202ENST00000454181 PDE4DIPQ5VU43 2346 aa30.02■■■□□ 2.4
LYSMD2-202ENST00000454181 SRCIN1Q9C0H9 1055 aa30.01■■■□□ 2.39
LYSMD2-202ENST00000454181 IFNL1Q8IU54 200 aa30■■■□□ 2.39
LYSMD2-202ENST00000454181 WNK4Q96J92 1243 aa30■■■□□ 2.39
LYSMD2-202ENST00000454181 CLMNQ96JQ2 1002 aa30■■■□□ 2.39
LYSMD2-202ENST00000454181 R3HDMLQ9H3Y0 253 aa30■■■□□ 2.39
LYSMD2-202ENST00000454181 HIBADHP31937 336 aaKnown RBP29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 TNFAIP1Q13829 316 aa29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 UBE4AQ14139 1066 aa29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 RASA3Q14644 834 aa29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 NBPF12Q5TAG4 269 aaPredicted RBP29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 OTUD7BQ6GQQ9 843 aa29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 SPINK5Q9NQ38 1064 aaPredicted RBP29.99■■■□□ 2.39
LYSMD2-202ENST00000454181 MFSD14BQ5SR56 506 aa29.98■■■□□ 2.39
LYSMD2-202ENST00000454181 TTF2Q9UNY4 1162 aaKnown RBP29.98■■■□□ 2.39
LYSMD2-202ENST00000454181 FAM205AQ6ZU69 1335 aa29.97■■■□□ 2.39
LYSMD2-202ENST00000454181 GYG1P46976 350 aa29.96■■■□□ 2.39
LYSMD2-202ENST00000454181 ANKRD13AQ8IZ07 590 aa29.96■■■□□ 2.39
LYSMD2-202ENST00000454181 TDRD7Q8NHU6 1098 aaKnown RBP29.96■■■□□ 2.39
LYSMD2-202ENST00000454181 VPS37DQ86XT2 251 aa29.95■■■□□ 2.39
LYSMD2-202ENST00000454181 FAM9BQ8IZU0 186 aa29.95■■■□□ 2.39
LYSMD2-202ENST00000454181 SERPINA10Q9UK55 444 aa29.95■■■□□ 2.39
LYSMD2-202ENST00000454181 SSC5DA1L4H1 1573 aa29.94■■■□□ 2.38
LYSMD2-202ENST00000454181 TNRC18O15417 2968 aaPredicted RBP29.94■■■□□ 2.38
LYSMD2-202ENST00000454181 USP2O75604 605 aaPredicted RBP29.94■■■□□ 2.38
LYSMD2-202ENST00000454181 ZNF70Q9UC06 446 aaPredicted RBP29.94■■■□□ 2.38
LYSMD2-202ENST00000454181 TRIM17Q9Y577 477 aa29.94■■■□□ 2.38
LYSMD2-202ENST00000454181 SPDYE2Q495Y8 402 aa29.93■■■□□ 2.38
LYSMD2-202ENST00000454181 PRPF38BQ5VTL8 546 aaKnown RBP29.93■■■□□ 2.38
LYSMD2-202ENST00000454181 SUCLG2Q96I99 432 aa29.93■■■□□ 2.38
LYSMD2-202ENST00000454181 FAM84BQ96KN1 310 aaPredicted RBP29.93■■■□□ 2.38
LYSMD2-202ENST00000454181 MROH5Q6ZUA9 1318 aa29.93■■■□□ 2.38
LYSMD2-202ENST00000454181 IGF2BP3O00425 579 aaKnown RBP eCLIP29.92■■■□□ 2.38
LYSMD2-202ENST00000454181 FRAT2O75474 233 aaPredicted RBP29.92■■■□□ 2.38
LYSMD2-202ENST00000454181 PUS3Q9BZE2 481 aaKnown RBP29.92■■■□□ 2.38
LYSMD2-202ENST00000454181 TDRD3Q9H7E2 651 aaKnown RBP29.92■■■□□ 2.38
LYSMD2-202ENST00000454181 AOX1Q06278 1338 aa29.92■■■□□ 2.38
LYSMD2-202ENST00000454181 TNNI2P48788 182 aa29.91■■■□□ 2.38
LYSMD2-202ENST00000454181 A0A1B0GUL6 1792 aa29.9■■■□□ 2.38
LYSMD2-202ENST00000454181 ECM29Q5VYK3 1845 aa29.9■■■□□ 2.38
LYSMD2-202ENST00000454181 DZIP1LQ8IYY4 767 aaKnown RBP29.9■■■□□ 2.38
LYSMD2-202ENST00000454181 ERO1AQ96HE7 468 aa29.9■■■□□ 2.38
LYSMD2-202ENST00000454181 NBPF7P0C2Y1 421 aaPredicted RBP29.89■■■□□ 2.38
LYSMD2-202ENST00000454181 CAVIN4Q5BKX8 364 aa29.89■■■□□ 2.38
LYSMD2-202ENST00000454181 ELP3Q9H9T3 547 aa29.89■■■□□ 2.38
LYSMD2-202ENST00000454181 RIPOR2Q9Y4F9 1068 aa29.89■■■□□ 2.38
LYSMD2-202ENST00000454181 CRKP46108 304 aa29.88■■■□□ 2.37
LYSMD2-202ENST00000454181 METTL24Q5JXM2 366 aa29.88■■■□□ 2.37
LYSMD2-202ENST00000454181 OTOP1Q7RTM1 612 aa29.88■■■□□ 2.37
LYSMD2-202ENST00000454181 TCP10L2B9ZVM9 353 aa29.87■■■□□ 2.37
LYSMD2-202ENST00000454181 CHAF1AQ13111 956 aaPredicted RBP29.87■■■□□ 2.37
LYSMD2-202ENST00000454181 CRHR2Q13324 411 aa29.87■■■□□ 2.37
LYSMD2-202ENST00000454181 OPTNQ96CV9 577 aa29.87■■■□□ 2.37
LYSMD2-202ENST00000454181 KAZALD1Q96I82 304 aa29.87■■■□□ 2.37
LYSMD2-202ENST00000454181 ZNF316A6NFI3 1004 aaPredicted RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms