RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 API5Q9BZZ5 524 aaKnown RBP20.64■□□□□ 0.89
NCKIPSD-208ENST00000454134 HIBADHP31937 336 aaKnown RBP20.63■□□□□ 0.89
NCKIPSD-208ENST00000454134 RGMBQ6NW40 437 aa20.63■□□□□ 0.89
NCKIPSD-208ENST00000454134 FAM84BQ96KN1 310 aaPredicted RBP20.63■□□□□ 0.89
NCKIPSD-208ENST00000454134 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
NCKIPSD-208ENST00000454134 PRDM10Q9NQV6 1147 aa20.63■□□□□ 0.89
NCKIPSD-208ENST00000454134 PCDHAC2Q9Y5I4 1007 aa20.63■□□□□ 0.89
NCKIPSD-208ENST00000454134 UBTFL1P0CB47 393 aaPredicted RBP20.62■□□□□ 0.89
NCKIPSD-208ENST00000454134 MMP14P50281 582 aa20.62■□□□□ 0.89
NCKIPSD-208ENST00000454134 TDRD7Q8NHU6 1098 aaKnown RBP20.62■□□□□ 0.89
NCKIPSD-208ENST00000454134 ZBED3Q96IU2 234 aaPredicted RBP20.62■□□□□ 0.89
NCKIPSD-208ENST00000454134 TSKSQ9UJT2 592 aa20.62■□□□□ 0.89
NCKIPSD-208ENST00000454134 RFX5P48382 616 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 ZNF157P51786 506 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 DLGAP5Q15398 846 aa20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 MOB2Q70IA6 237 aa20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 IQSEC3Q9UPP2 1182 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-208ENST00000454134 FAM205AQ6ZU69 1335 aa20.6■□□□□ 0.89
NCKIPSD-208ENST00000454134 FAM155AB1AL88 458 aaPredicted RBP20.6■□□□□ 0.89
NCKIPSD-208ENST00000454134 CAPN15O75808 1086 aa20.6■□□□□ 0.89
NCKIPSD-208ENST00000454134 PDE8BO95263 885 aa20.6■□□□□ 0.89
NCKIPSD-208ENST00000454134 FKBP1AP62942 108 aaKnown RBP20.6■□□□□ 0.89
NCKIPSD-208ENST00000454134 NOGQ13253 232 aa20.6■□□□□ 0.89
NCKIPSD-208ENST00000454134 KIF16BQ96L93 1317 aa20.59■□□□□ 0.89
NCKIPSD-208ENST00000454134 CFAP100Q494V2 611 aa20.59■□□□□ 0.89
NCKIPSD-208ENST00000454134 MEIS3Q99687 375 aa20.59■□□□□ 0.89
NCKIPSD-208ENST00000454134 LRRFIP2Q9Y608 721 aaKnown RBP20.59■□□□□ 0.89
NCKIPSD-208ENST00000454134 EYA2O00167 538 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 BCAR3O75815 825 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 PTPN12Q05209 780 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 MFSD14BQ5SR56 506 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 FBXO33Q7Z6M2 555 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 VPS37DQ86XT2 251 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 APOBEC3FQ8IUX4 373 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 CCDC102AQ96A19 550 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 PAPPA2Q9BXP8 1791 aa20.58■□□□□ 0.89
NCKIPSD-208ENST00000454134 AOX1Q06278 1338 aa20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 UBE2Q2LH0YL09 131 aa20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 MTMR14Q8NCE2 650 aa20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 ARHGAP45Q92619 1136 aa20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 PRMT6Q96LA8 375 aaPredicted RBP20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 SIL1Q9H173 461 aa20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
NCKIPSD-208ENST00000454134 CLRN2A0PK11 232 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 SPDYE2BA6NHP3 402 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 SLC10A3P09131 477 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 SPDYE6P0CI01 402 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 BCAMP50895 628 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 RBM5P52756 815 aaKnown RBP eCLIP20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 FKBP1BP68106 108 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 KIF23Q02241 960 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 CHAF1AQ13111 956 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 TTLL12Q14166 644 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 CAVIN4Q5BKX8 364 aa20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 INTS3Q68E01 1043 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 FRAT1Q92837 279 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-208ENST00000454134 FRAT2O75474 233 aaPredicted RBP20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 FGFR2P21802 821 aa20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 PRKG1Q13976 671 aa20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 GRIK5Q16478 980 aa20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 ATG9AQ7Z3C6 839 aa20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 RASAL3Q86YV0 1011 aa20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 TTF2Q9UNY4 1162 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-208ENST00000454134 TRIM27P14373 513 aa20.54■□□□□ 0.88
NCKIPSD-208ENST00000454134 NF2P35240 595 aa20.54■□□□□ 0.88
NCKIPSD-208ENST00000454134 DEFB129Q9H1M3 183 aa20.54■□□□□ 0.88
NCKIPSD-208ENST00000454134 PA2G4Q9UQ80 394 aaKnown RBP20.54■□□□□ 0.88
NCKIPSD-208ENST00000454134 IPO8O15397 1037 aaKnown RBP20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 CA12O43570 354 aa20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 MYO1BO43795 1136 aa20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 IFIT1P09914 478 aaKnown RBP20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 CLUAP1Q96AJ1 413 aa20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 VEZTQ9HBM0 779 aa20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 FZD1Q9UP38 647 aa20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 ECM29Q5VYK3 1845 aa20.53■□□□□ 0.88
NCKIPSD-208ENST00000454134 ATF7IPQ6VMQ6 1270 aa20.52■□□□□ 0.88
NCKIPSD-208ENST00000454134 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.88
NCKIPSD-208ENST00000454134 ARAP2Q8WZ64 1704 aa20.52■□□□□ 0.88
NCKIPSD-208ENST00000454134 CIAO1O76071 339 aa20.51■□□□□ 0.87
NCKIPSD-208ENST00000454134 SLC5A1P13866 664 aa20.51■□□□□ 0.87
NCKIPSD-208ENST00000454134 LPIN2Q92539 896 aa20.51■□□□□ 0.87
NCKIPSD-208ENST00000454134 GNAI3P08754 354 aa20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 CRKP46108 304 aa20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 CSRNP1Q96S65 589 aa20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 CEP126Q9P2H0 1117 aa20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 SERPINA10Q9UK55 444 aa20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
NCKIPSD-208ENST00000454134 ATP2B3Q16720 1220 aa20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 ARMC9Q7Z3E5 817 aa20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 DZIP1LQ8IYY4 767 aaKnown RBP20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 TBC1D22AQ8WUA7 517 aa20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 FBXO3Q9UK99 471 aa20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 ANGEL1Q9UNK9 670 aaKnown RBP20.49■□□□□ 0.87
NCKIPSD-208ENST00000454134 SSC5DA1L4H1 1573 aa20.48■□□□□ 0.87
NCKIPSD-208ENST00000454134 MKRN3Q13064 507 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms