RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 DENND2AQ9ULE3 1009 aa17.93■□□□□ 0.46
NCKIPSD-207ENST00000453349 MYO3BQ8WXR4 1341 aa17.93■□□□□ 0.46
NCKIPSD-207ENST00000453349 IGHDP01880 384 aa17.92■□□□□ 0.46
NCKIPSD-207ENST00000453349 FKBP1AP62942 108 aaKnown RBP17.92■□□□□ 0.46
NCKIPSD-207ENST00000453349 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
NCKIPSD-207ENST00000453349 DACT2Q5SW24 774 aa17.92■□□□□ 0.46
NCKIPSD-207ENST00000453349 HACL1Q9UJ83 578 aa17.92■□□□□ 0.46
NCKIPSD-207ENST00000453349 FAM205AQ6ZU69 1335 aa17.92■□□□□ 0.46
NCKIPSD-207ENST00000453349 H7C1D1 291 aa17.91■□□□□ 0.46
NCKIPSD-207ENST00000453349 SMARCA5O60264 1052 aaPredicted RBP17.91■□□□□ 0.46
NCKIPSD-207ENST00000453349 ANKRD45Q5TZF3 282 aa17.91■□□□□ 0.46
NCKIPSD-207ENST00000453349 TBC1D22AQ8WUA7 517 aa17.91■□□□□ 0.46
NCKIPSD-207ENST00000453349 NMRK2Q9NPI5 230 aa17.91■□□□□ 0.46
NCKIPSD-207ENST00000453349 CNOT7Q9UIV1 285 aaKnown RBP17.91■□□□□ 0.46
NCKIPSD-207ENST00000453349 ARAP2Q8WZ64 1704 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 WDR90Q96KV7 1748 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 ZBTB22O15209 634 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 SCNN1DP51172 638 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 WDR66Q8TBY9 1149 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 GPRC5DQ9NZD1 345 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 DBNLQ9UJU6 430 aaKnown RBP17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 JAG2Q9Y219 1238 aa17.9■□□□□ 0.46
NCKIPSD-207ENST00000453349 POTECB2RU33 542 aa17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 ARID4AP29374 1257 aaPredicted RBP17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 EPS15P42566 896 aa17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 MMP14P50281 582 aa17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 MFSD14BQ5SR56 506 aa17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 C16orf71Q8IYS4 520 aaPredicted RBP17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 OGFOD1Q8N543 542 aa17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 TLR7Q9NYK1 1049 aaKnown RBP17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 HDAC9Q9UKV0 1011 aa17.89■□□□□ 0.45
NCKIPSD-207ENST00000453349 SCN9AQ15858 1988 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 USP17L8P0C7I0 530 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 EPHX2P34913 555 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 MICALL2Q8IY33 904 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 GMLQ99445 158 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 UTRNP46939 3433 aa17.88■□□□□ 0.45
NCKIPSD-207ENST00000453349 PSME4Q14997 1843 aa17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 RASGRF1Q13972 1273 aa17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 PNMA8AQ86V59 439 aaPredicted RBP17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 KIAA0825Q8IV33 1275 aa17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 ZGPATQ8N5A5 531 aaKnown RBP17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 SPATA5Q8NB90 893 aa17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 TAF1DQ9H5J8 278 aaPredicted RBP17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 ADARB2Q9NS39 739 aaKnown RBP17.87■□□□□ 0.45
NCKIPSD-207ENST00000453349 USP50Q70EL3 339 aaPredicted RBP17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 CERS5Q8N5B7 392 aa17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 GPATCH3Q96I76 525 aa17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 HMG20BQ9P0W2 317 aa17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 SUGT1Q9Y2Z0 365 aa17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 PDS5AQ29RF7 1337 aaKnown RBP17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 SCN4AP35499 1836 aa17.86■□□□□ 0.45
NCKIPSD-207ENST00000453349 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-207ENST00000453349 MCAMP43121 646 aa17.85■□□□□ 0.45
NCKIPSD-207ENST00000453349 RBM26Q5T8P6 1007 aaKnown RBP17.85■□□□□ 0.45
NCKIPSD-207ENST00000453349 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
NCKIPSD-207ENST00000453349 SPTY2D1Q68D10 685 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-207ENST00000453349 SALL1Q9NSC2 1324 aa17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 KIF3CO14782 793 aa17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 ZNF280AP59817 542 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 EAPPQ56P03 285 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 ABCF2Q9UG63 623 aa17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 CLEC11AQ9Y240 323 aa17.84■□□□□ 0.45
NCKIPSD-207ENST00000453349 MAST3O60307 1309 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 SHTN1A0MZ66 631 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 NUCB1Q02818 461 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 SCARF1Q14162 830 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 SAMD7Q7Z3H4 446 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 MYOZ2Q9NPC6 264 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 SNRKQ9NRH2 765 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.44
NCKIPSD-207ENST00000453349 MYH13Q9UKX3 1938 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 ATP5JP18859 108 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 ZAP70P43403 619 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 RBM5P52756 815 aaKnown RBP eCLIP17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 KIF4BQ2VIQ3 1234 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 TBC1D10BQ4KMP7 808 aaPredicted RBP17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 CCDC136Q96JN2 1154 aa17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 ZNF646O15015 1829 aaPredicted RBP17.82■□□□□ 0.44
NCKIPSD-207ENST00000453349 DLGAP5Q15398 846 aa17.81■□□□□ 0.44
NCKIPSD-207ENST00000453349 MRIQ9BWK5 157 aa17.81■□□□□ 0.44
NCKIPSD-207ENST00000453349 LNPKQ9C0E8 428 aa17.81■□□□□ 0.44
NCKIPSD-207ENST00000453349 LRP2BPQ9P2M1 347 aa17.81■□□□□ 0.44
NCKIPSD-207ENST00000453349 COL1A1P02452 1464 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-207ENST00000453349 TTC41PQ6P2S7 1318 aa17.8■□□□□ 0.44
NCKIPSD-207ENST00000453349 ERC2O15083 957 aa17.8■□□□□ 0.44
NCKIPSD-207ENST00000453349 TOMM70O94826 608 aa17.8■□□□□ 0.44
NCKIPSD-207ENST00000453349 CYP2E1P05181 493 aaPredicted RBP17.8■□□□□ 0.44
NCKIPSD-207ENST00000453349 HDLBPQ00341 1268 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-207ENST00000453349 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms