RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TDRD7Q8NHU6 1098 aaKnown RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 C7orf43Q8WVR3 580 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 MAP4K1Q92918 833 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 KCNB2Q92953 911 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 OSBP2Q969R2 916 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 ZNF622Q969S3 477 aaKnown RBP eCLIP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 GPR101Q96P66 508 aaPredicted RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 IPO9Q96P70 1041 aaKnown RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 SGIP1Q9BQI5 828 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 ANO2Q9NQ90 1003 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 ANKIB1Q9P2G1 1089 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 PALD1Q9ULE6 856 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 NSFL1CQ9UNZ2 370 aaKnown RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 IQSEC3Q9UPP2 1182 aaPredicted RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 ARFGEF1Q9Y6D6 1849 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 PDS5AQ29RF7 1337 aaKnown RBP7.24□□□□□ -1.25
SDC4P-201ENST00000453285 CCDC171Q6TFL3 1326 aa7.24□□□□□ -1.25
SDC4P-201ENST00000453285 FOCADQ5VW36 1801 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 ECM29Q5VYK3 1845 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 M0R2C6 588 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 ZBTB7AO95365 584 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 ZFYP08048 801 aaPredicted RBP7.23□□□□□ -1.25
SDC4P-201ENST00000453285 NECTIN1Q15223 517 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 UBE3CQ15386 1083 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 CCDC129Q6ZRS4 1044 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 KIAA1211Q6ZU35 1233 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 APPBP2Q92624 585 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 CNKSR1Q969H4 720 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 MTFR1LQ9H019 292 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 GNL3LQ9NVN8 582 aaKnown RBP7.23□□□□□ -1.25
SDC4P-201ENST00000453285 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 WWC3Q9ULE0 1092 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 DENND2AQ9ULE3 1009 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 ATF5Q9Y2D1 282 aaPredicted RBP7.23□□□□□ -1.25
SDC4P-201ENST00000453285 MAST3O60307 1309 aa7.23□□□□□ -1.25
SDC4P-201ENST00000453285 FOXP2O15409 715 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 UFL1O94874 794 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 IL1R1P14778 569 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 PDE6AP16499 860 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 ANAPC15P60006 121 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 LRRFIP1Q32MZ4 808 aaKnown RBP7.22□□□□□ -1.25
SDC4P-201ENST00000453285 SLC9C2Q5TAH2 1124 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 ZSCAN25Q6NSZ9 544 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 PRPF40BQ6NWY9 871 aaKnown RBP7.22□□□□□ -1.25
SDC4P-201ENST00000453285 VPS37DQ86XT2 251 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 RASEFQ8IZ41 740 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 MPNDQ8N594 471 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 ZNF384Q8TF68 577 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.22□□□□□ -1.25
SDC4P-201ENST00000453285 PUS7LQ9H0K6 701 aaKnown RBP7.22□□□□□ -1.25
SDC4P-201ENST00000453285 CD209Q9NNX6 404 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 RBM8AQ9Y5S9 174 aaKnown RBP7.22□□□□□ -1.25
SDC4P-201ENST00000453285 SNX14Q9Y5W7 946 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 MYH1P12882 1939 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 ZNF532Q9HCE3 1301 aa7.22□□□□□ -1.25
SDC4P-201ENST00000453285 A0A0G2JLW4 131 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 PSDA5PKW4 1024 aaPredicted RBP7.21□□□□□ -1.26
SDC4P-201ENST00000453285 C6orf229H3BNL8 230 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 IDH1O75874 414 aaKnown RBP7.21□□□□□ -1.26
SDC4P-201ENST00000453285 CD2BP2O95400 341 aaKnown RBP7.21□□□□□ -1.26
SDC4P-201ENST00000453285 HSPD1P10809 573 aaKnown RBP7.21□□□□□ -1.26
SDC4P-201ENST00000453285 DPEP1P16444 411 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 PTGER2P43116 358 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 MAP3K12Q12852 859 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 RABEP1Q15276 862 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 WASHC4Q2M389 1173 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 VPS53Q5VIR6 699 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 ZNF804AQ7Z570 1209 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 MAGEB6Q8N7X4 407 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 SNX21Q969T3 373 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 DSCC1Q9BVC3 393 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 RTFDC1Q9BY42 306 aaPredicted RBP7.21□□□□□ -1.26
SDC4P-201ENST00000453285 TBC1D2Q9BYX2 928 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 SBF1O95248 1867 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 SALL1Q9NSC2 1324 aa7.21□□□□□ -1.26
SDC4P-201ENST00000453285 DICER1Q9UPY3 1922 aaKnown RBP7.21□□□□□ -1.26
SDC4P-201ENST00000453285 LAMB1P07942 1786 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 ADAMTSL1Q8N6G6 1762 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 SLC27A2O14975 620 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 RIMBP2O15034 1052 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 GPAA1O43292 621 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 MCCP23508 829 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 POLD1P28340 1107 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 SLC4A3P48751 1232 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 TGFB2P61812 414 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 GRIK5Q16478 980 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 CREB3L3Q68CJ9 461 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 CC2D2BQ6DHV5 1058 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 DPP8Q6V1X1 898 aaPredicted RBP7.2□□□□□ -1.26
SDC4P-201ENST00000453285 ADGRA1Q86SQ6 560 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 WDR66Q8TBY9 1149 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 NSUN4Q96CB9 384 aaKnown RBP7.2□□□□□ -1.26
SDC4P-201ENST00000453285 STRBPQ96SI9 672 aaKnown RBP7.2□□□□□ -1.26
SDC4P-201ENST00000453285 COA1Q9GZY4 146 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 LRP2BPQ9P2M1 347 aa7.2□□□□□ -1.26
SDC4P-201ENST00000453285 ABCF2Q9UG63 623 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms