RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TATDN2Q93075 761 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 ZKSCAN4Q969J2 545 aaPredicted RBP9.6□□□□□ -0.87
SMCO1-202ENST00000452776 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 IFNKQ9P0W0 207 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 CPSF2Q9P2I0 782 aaKnown RBP9.6□□□□□ -0.87
SMCO1-202ENST00000452776 SAMD9LQ8IVG5 1584 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 VWA3AA6NCI4 1184 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 WWC2Q6AWC2 1192 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 PGBD1Q96JS3 809 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 STK31Q9BXU1 1019 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 LSG1Q9H089 658 aaKnown RBP9.59□□□□□ -0.87
SMCO1-202ENST00000452776 ABCB6Q9NP58 842 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
SMCO1-202ENST00000452776 CAPN7Q9Y6W3 813 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 ADAMTS12P58397 1594 aa9.59□□□□□ -0.87
SMCO1-202ENST00000452776 WDHD1O75717 1129 aaPredicted RBP9.59□□□□□ -0.88
SMCO1-202ENST00000452776 SETSIPP0DME0 302 aa9.59□□□□□ -0.88
SMCO1-202ENST00000452776 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.88
SMCO1-202ENST00000452776 IRAK1P51617 712 aa9.59□□□□□ -0.88
SMCO1-202ENST00000452776 FILIP1LQ4L180 1135 aa9.59□□□□□ -0.88
SMCO1-202ENST00000452776 RSRC1Q96IZ7 334 aaKnown RBP9.59□□□□□ -0.88
SMCO1-202ENST00000452776 RPGRIP1Q96KN7 1286 aa9.59□□□□□ -0.88
SMCO1-202ENST00000452776 NAA15Q9BXJ9 866 aaKnown RBP9.59□□□□□ -0.88
SMCO1-202ENST00000452776 ANKZF1Q9H8Y5 726 aa9.59□□□□□ -0.88
SMCO1-202ENST00000452776 KLC4Q9NSK0 619 aa9.59□□□□□ -0.88
SMCO1-202ENST00000452776 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 ARHGEF40Q8TER5 1519 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CTAGE15A4D2H0 777 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 SRRM3A6NNA2 597 aaPredicted RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 GOLGA8KD6RF30 607 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 APBB1O00213 710 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 MEFVO15553 781 aaPredicted RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 KIF5CO60282 957 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 RTN2O75298 545 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CTAGE8P0CG41 777 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 TOP1P11387 765 aaKnown RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CCT5P48643 541 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 FNTAP49354 379 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CFAP70Q5T0N1 1121 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 FBXW10Q5XX13 1052 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 ISM2Q6H9L7 571 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CTAGE6Q86UF2 777 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CTAGE4Q8IX94 777 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC148Q8NFR7 591 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CALR3Q96L12 384 aaKnown RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 CAPS2Q9BXY5 557 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 ACTR5Q9H9F9 607 aaPredicted RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 ATP6V0A4Q9HBG4 840 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 MBIPQ9NS73 344 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
SMCO1-202ENST00000452776 MYO1AQ9UBC5 1043 aa9.58□□□□□ -0.88
SMCO1-202ENST00000452776 INO80Q9ULG1 1556 aaPredicted RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 URB2Q14146 1524 aaKnown RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 A0A1W2PQ27 194 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 A0A1W2PQ64 194 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 A0A1W2PQD8 194 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 HIP1O00291 1037 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 OPA1O60313 960 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 ZEB2O60315 1214 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 PRPF6O94906 941 aaKnown RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CLNS1AP54105 237 aaKnown RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 NLRP12P59046 1061 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 ATP8B2P98198 1209 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 FANCCQ00597 558 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CEP85LQ5SZL2 805 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 NAIF1Q69YI7 327 aaPredicted RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CDC37L1Q7L3B6 337 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 TSPYL6Q8N831 410 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 MAB21L3Q8N8X9 362 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC26Q8TAB7 109 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 BCAS4Q8TDM0 211 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 RUBCNQ92622 972 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 BAG1Q99933 345 aaPredicted RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 SDF4Q9BRK5 362 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 KIAA1468Q9P260 1216 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 STK26Q9P289 416 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CDC42BPGQ6DT37 1551 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CDC42BPBQ9Y5S2 1711 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CDHR2Q9BYE9 1310 aa9.57□□□□□ -0.88
SMCO1-202ENST00000452776 CDK12Q9NYV4 1490 aaPredicted RBP9.57□□□□□ -0.88
SMCO1-202ENST00000452776 TARSL2A2RTX5 802 aaKnown RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 H3BQV1 296 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 EIF3HO15372 352 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 UBASH3AP57075 661 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 STIM1Q13586 685 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 ME3Q16798 604 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 IFFO2Q5TF58 517 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 VSTM4Q8IW00 320 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 PROM2Q8N271 834 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 ENGASEQ8NFI3 743 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 ZNF483Q8TF39 744 aaPredicted RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 SAAL1Q96ER3 474 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 JAKMIP1Q96N16 626 aaKnown RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 CRACR2AQ9BSW2 395 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms