RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
VPS8-212ENST00000452666 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
VPS8-212ENST00000452666 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
VPS8-212ENST00000452666 C19orf57Q0VDD7 668 aa6.72□□□□□ -1.33
VPS8-212ENST00000452666 PTK7Q13308 1070 aa6.72□□□□□ -1.33
VPS8-212ENST00000452666 ZNF574Q6ZN55 896 aaPredicted RBP6.72□□□□□ -1.33
VPS8-212ENST00000452666 CEP120Q8N960 986 aa6.72□□□□□ -1.33
VPS8-212ENST00000452666 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
VPS8-212ENST00000452666 ZSCAN18Q8TBC5 510 aaPredicted RBP6.72□□□□□ -1.33
VPS8-212ENST00000452666 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
VPS8-212ENST00000452666 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
VPS8-212ENST00000452666 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
VPS8-212ENST00000452666 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
VPS8-212ENST00000452666 MESP2Q0VG99 397 aa6.71□□□□□ -1.34
VPS8-212ENST00000452666 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
VPS8-212ENST00000452666 EZH1Q92800 747 aaPredicted RBP6.71□□□□□ -1.34
VPS8-212ENST00000452666 RC3H2Q9HBD1 1191 aaKnown RBP6.71□□□□□ -1.34
VPS8-212ENST00000452666 COX20Q5RI15 118 aa6.7□□□□□ -1.34
VPS8-212ENST00000452666 ETFBKMTQ8IXQ9 262 aa6.7□□□□□ -1.34
VPS8-212ENST00000452666 GATA6Q92908 595 aa6.7□□□□□ -1.34
VPS8-212ENST00000452666 ABI2Q9NYB9 513 aaPredicted RBP6.7□□□□□ -1.34
VPS8-212ENST00000452666 A6NJR5 290 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 DRD2P14416 443 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 RAP1GAPP47736 663 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 ZNF765Q7L2R6 523 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 SPRED2Q7Z698 418 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 CILP2Q8IUL8 1156 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 ANKMY2Q8IV38 441 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 MISP3Q96FF7 219 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 USP26Q9BXU7 913 aa6.69□□□□□ -1.34
VPS8-212ENST00000452666 BRD2P25440 801 aaKnown RBP6.68□□□□□ -1.34
VPS8-212ENST00000452666 CFPP27918 469 aa6.68□□□□□ -1.34
VPS8-212ENST00000452666 WFDC3Q8IUB2 231 aa6.68□□□□□ -1.34
VPS8-212ENST00000452666 SIAH1Q8IUQ4 282 aa6.68□□□□□ -1.34
VPS8-212ENST00000452666 C2CD4AQ8NCU7 369 aaPredicted RBP6.68□□□□□ -1.34
VPS8-212ENST00000452666 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
VPS8-212ENST00000452666 LOC100289279A0A1B0GTE1 492 aa6.67□□□□□ -1.34
VPS8-212ENST00000452666 LRRC10BA6NIK2 292 aa6.67□□□□□ -1.34
VPS8-212ENST00000452666 RAD21O60216 631 aa6.67□□□□□ -1.34
VPS8-212ENST00000452666 CYP2E1P05181 493 aaPredicted RBP6.67□□□□□ -1.34
VPS8-212ENST00000452666 MAP7Q14244 749 aa6.67□□□□□ -1.34
VPS8-212ENST00000452666 EXOSC6Q5RKV6 272 aaKnown RBP6.67□□□□□ -1.34
VPS8-212ENST00000452666 LRRC56Q8IYG6 542 aaPredicted RBP6.67□□□□□ -1.34
VPS8-212ENST00000452666 POM121Q96HA1 1249 aa6.67□□□□□ -1.34
VPS8-212ENST00000452666 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
VPS8-212ENST00000452666 FAM196BA6NMK8 535 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L15C9J2P7 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L10C9JJH3 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L13C9JLJ4 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L12C9JPN9 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L11C9JVI0 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L21D6R901 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L18D6R9N7 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L22D6RA61 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L17D6RBQ6 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L19D6RCP7 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L20D6RJB6 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
VPS8-212ENST00000452666 FUT4P22083 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 USP17L24Q0WX57 530 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 LCNL1Q6ZST4 164 aa6.66□□□□□ -1.34
VPS8-212ENST00000452666 TFIP11Q9UBB9 837 aaKnown RBP6.66□□□□□ -1.34
VPS8-212ENST00000452666 TSPAN15O95858 294 aa6.65□□□□□ -1.34
VPS8-212ENST00000452666 SOX4Q06945 474 aaPredicted RBP6.65□□□□□ -1.34
VPS8-212ENST00000452666 HGSNATQ68CP4 663 aa6.65□□□□□ -1.34
VPS8-212ENST00000452666 C1QL4Q86Z23 238 aa6.65□□□□□ -1.34
VPS8-212ENST00000452666 PPP1R16BQ96T49 567 aa6.65□□□□□ -1.34
VPS8-212ENST00000452666 FAM53CQ9NYF3 392 aa6.65□□□□□ -1.34
VPS8-212ENST00000452666 SOX13Q9UN79 622 aa6.65□□□□□ -1.34
VPS8-212ENST00000452666 PDE2AO00408 941 aaPredicted RBP6.64□□□□□ -1.35
VPS8-212ENST00000452666 ZSCAN22P10073 491 aaPredicted RBP6.64□□□□□ -1.35
VPS8-212ENST00000452666 TTLL10Q6ZVT0 673 aa6.64□□□□□ -1.35
VPS8-212ENST00000452666 MBNL3Q9NUK0 354 aaKnown RBP6.64□□□□□ -1.35
VPS8-212ENST00000452666 LMCD1Q9NZU5 365 aa6.64□□□□□ -1.35
VPS8-212ENST00000452666 DLGAP3O95886 979 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 NFICP08651 508 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 BNIP3Q12983 259 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 IKBKEQ14164 716 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 LRRN4CLQ8ND94 238 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 PI4K2BQ8TCG2 481 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 ADAMTS6Q9UKP5 1117 aa6.63□□□□□ -1.35
VPS8-212ENST00000452666 NFKBIEO00221 500 aa6.62□□□□□ -1.35
VPS8-212ENST00000452666 SOX1O00570 391 aaPredicted RBP6.62□□□□□ -1.35
VPS8-212ENST00000452666 RAB6AP20340 208 aa6.62□□□□□ -1.35
VPS8-212ENST00000452666 KANK4Q5T7N3 995 aaPredicted RBP6.62□□□□□ -1.35
VPS8-212ENST00000452666 ANKLE2Q86XL3 938 aa6.62□□□□□ -1.35
VPS8-212ENST00000452666 SOX17Q9H6I2 414 aaPredicted RBP6.62□□□□□ -1.35
VPS8-212ENST00000452666 KANSL3Q9P2N6 904 aa6.62□□□□□ -1.35
VPS8-212ENST00000452666 CD8BP10966 210 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 ADH5P11766 374 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 FKBP5Q13451 457 aaPredicted RBP6.61□□□□□ -1.35
VPS8-212ENST00000452666 C16orf46Q6P387 395 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 ARXQ96QS3 562 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 SEMA6CQ9H3T2 930 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 DZANK1Q9NVP4 752 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 ACTL7BQ9Y614 415 aa6.61□□□□□ -1.35
VPS8-212ENST00000452666 ZAP70P43403 619 aa6.6□□□□□ -1.35
VPS8-212ENST00000452666 MLANAQ16655 118 aa6.6□□□□□ -1.35
VPS8-212ENST00000452666 PDE12Q6L8Q7 609 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms