RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SNX29Q8TEQ0 813 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 EDEM1Q92611 657 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 NXPE3Q969Y0 559 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 CCDC97Q96F63 343 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-209ENST00000452660 METTL22Q9BUU2 404 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-209ENST00000452660 CHRDQ9H2X0 955 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 ZFYVE1Q9HBF4 777 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 CYP4F12Q9HCS2 524 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 SLAIN2Q9P270 581 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 MTMR7Q9Y216 660 aa5.05□□□□□ -1.6
LRCH3-209ENST00000452660 PPP1R15AO75807 674 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-209ENST00000452660 PRNPP04156 253 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 TAL1P17542 331 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-209ENST00000452660 NUTM2GQ5VZR2 741 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 SHKBP1Q8TBC3 707 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 GGNBP2Q9H3C7 697 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 PIM2Q9P1W9 311 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 KANSL3Q9P2N6 904 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 SEPT3Q9UH03 358 aa5.04□□□□□ -1.6
LRCH3-209ENST00000452660 DDX3YO15523 660 aaKnown RBP5.03□□□□□ -1.6
LRCH3-209ENST00000452660 GAS2O43903 313 aaKnown RBP5.03□□□□□ -1.6
LRCH3-209ENST00000452660 FAM13AO94988 1023 aa5.03□□□□□ -1.6
LRCH3-209ENST00000452660 MAP4P27816 1152 aaKnown RBP5.03□□□□□ -1.6
LRCH3-209ENST00000452660 EIF1AXP47813 144 aaKnown RBP5.03□□□□□ -1.6
LRCH3-209ENST00000452660 SF3B2Q13435 895 aaKnown RBP5.03□□□□□ -1.6
LRCH3-209ENST00000452660 IKBKEQ14164 716 aa5.03□□□□□ -1.6
LRCH3-209ENST00000452660 EXOSC6Q5RKV6 272 aaKnown RBP5.03□□□□□ -1.6
LRCH3-209ENST00000452660 VN1R5Q7Z5H4 357 aa5.03□□□□□ -1.6
LRCH3-209ENST00000452660 OSMRQ99650 979 aa5.03□□□□□ -1.6
LRCH3-209ENST00000452660 YIPF2Q9BWQ6 316 aa5.03□□□□□ -1.6
LRCH3-209ENST00000452660 KCNF1Q9H3M0 494 aa5.03□□□□□ -1.6
LRCH3-209ENST00000452660 SOX1O00570 391 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-209ENST00000452660 TNFRSF21O75509 655 aa5.02□□□□□ -1.61
LRCH3-209ENST00000452660 FOSL1P15407 271 aa5.02□□□□□ -1.61
LRCH3-209ENST00000452660 SSFA2P28290 1259 aa5.02□□□□□ -1.61
LRCH3-209ENST00000452660 DNM1Q05193 864 aaKnown RBP5.02□□□□□ -1.61
LRCH3-209ENST00000452660 ATCAYQ86WG3 371 aa5.02□□□□□ -1.61
LRCH3-209ENST00000452660 EZH1Q92800 747 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-209ENST00000452660 ATG3Q9NT62 314 aa5.02□□□□□ -1.61
LRCH3-209ENST00000452660 ADGRE2Q9UHX3 823 aa5.02□□□□□ -1.61
LRCH3-209ENST00000452660 SYNGAP1Q96PV0 1343 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 LOC100289279A0A1B0GTE1 492 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 PHACTR2O75167 634 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 ESRRAP11474 423 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-209ENST00000452660 CDC25BP30305 580 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 NLRP12P59046 1061 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 MSMPQ1L6U9 139 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 GTF3C2Q8WUA4 911 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-209ENST00000452660 FBXL18Q96ME1 805 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 ZKSCAN3Q9BRR0 538 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 AMOTL2Q9Y2J4 779 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 LEMD3Q9Y2U8 911 aa5.01□□□□□ -1.61
LRCH3-209ENST00000452660 ARID1BQ8NFD5 2236 aaPredicted RBP5□□□□□ -1.61
LRCH3-209ENST00000452660 WDR64B1ANS9 1081 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 ADAMTS4O75173 837 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 MPSTP25325 297 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 C8orf34Q49A92 452 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 PAOXQ6QHF9 649 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 GJD3Q8N144 294 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 SLC7A3Q8WY07 619 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 NRSN2Q9GZP1 204 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 RNF114Q9Y508 228 aa5□□□□□ -1.61
LRCH3-209ENST00000452660 FAM95CA0A1B0GW59 222 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 TMEM88BA6NKF7 163 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 ACPPP15309 386 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 CYP27A1Q02318 531 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 SGO2Q562F6 1265 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 VSIG10LQ86VR7 867 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 C12orf50Q8NA57 414 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-209ENST00000452660 OSBPL1AQ9BXW6 950 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 POLIQ9UNA4 740 aa4.99□□□□□ -1.61
LRCH3-209ENST00000452660 ANGEL1Q9UNK9 670 aaKnown RBP4.99□□□□□ -1.61
LRCH3-209ENST00000452660 EREGO14944 169 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 CYP11A1P05108 521 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 F13BP05160 661 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 NEFLP07196 543 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 USP11P51784 963 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 FKBP4Q02790 459 aaKnown RBP eCLIP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 SOX4Q06945 474 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 PEAR1Q5VY43 1037 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 CBLL1Q75N03 491 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 ZAR1Q86SH2 424 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 C2CD4AQ8NCU7 369 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 DDX54Q8TDD1 881 aaKnown RBP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 MFSD14AQ96MC6 490 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 HHIPQ96QV1 700 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 ZFYVE28Q9HCC9 887 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 BSDC1Q9NW68 430 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 CCDC39Q9UFE4 941 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 EGFL7Q9UHF1 273 aa4.98□□□□□ -1.61
LRCH3-209ENST00000452660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-209ENST00000452660 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
LRCH3-209ENST00000452660 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-209ENST00000452660 JUNBP17275 347 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-209ENST00000452660 PTPN12Q05209 780 aaKnown RBP4.97□□□□□ -1.61
LRCH3-209ENST00000452660 MAP7Q14244 749 aa4.97□□□□□ -1.61
LRCH3-209ENST00000452660 CCNJLQ8IV13 435 aa4.97□□□□□ -1.61
LRCH3-209ENST00000452660 GALNT12Q8IXK2 581 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms