RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
SCN9A-204ENST00000452182 PHKA1P46020 1223 aa14.18□□□□□ -0.14
SCN9A-204ENST00000452182 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
SCN9A-204ENST00000452182 NIM1KQ8IY84 436 aa14.18□□□□□ -0.14
SCN9A-204ENST00000452182 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
SCN9A-204ENST00000452182 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.18□□□□□ -0.14
SCN9A-204ENST00000452182 TIAM2Q8IVF5 1701 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 PDS5AQ29RF7 1337 aaKnown RBP14.17□□□□□ -0.14
SCN9A-204ENST00000452182 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
SCN9A-204ENST00000452182 ECE2O60344 883 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 DBNDD1Q9H9R9 158 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 ECHDC1Q9NTX5 307 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 STAP2Q9UGK3 403 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 ZNRF3Q9ULT6 936 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 AKAP11Q9UKA4 1901 aa14.17□□□□□ -0.14
SCN9A-204ENST00000452182 ZNF646O15015 1829 aaPredicted RBP14.16□□□□□ -0.14
SCN9A-204ENST00000452182 SCN9AQ15858 1988 aa14.16□□□□□ -0.14
SCN9A-204ENST00000452182 FZD9O00144 591 aa14.16□□□□□ -0.14
SCN9A-204ENST00000452182 MX1P20591 662 aa14.16□□□□□ -0.14
SCN9A-204ENST00000452182 TTC39AQ5SRH9 613 aa14.16□□□□□ -0.14
SCN9A-204ENST00000452182 YDJCA8MPS7 323 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 ATP5JP18859 108 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 C9orf131Q5VYM1 1079 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 OTUD7AQ8TE49 926 aaPredicted RBP14.15□□□□□ -0.14
SCN9A-204ENST00000452182 OSBPL3Q9H4L5 887 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 DENND2AQ9ULE3 1009 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 AOX1Q06278 1338 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 FAM205AQ6ZU69 1335 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 PDE4AP27815 886 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 PDE1AP54750 535 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 RASGRF1Q13972 1273 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 PLEKHM2Q8IWE5 1019 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 BCL11AQ9H165 835 aa14.15□□□□□ -0.14
SCN9A-204ENST00000452182 ERC2O15083 957 aa14.14□□□□□ -0.15
SCN9A-204ENST00000452182 MCAMP43121 646 aa14.14□□□□□ -0.15
SCN9A-204ENST00000452182 STRIP1Q5VSL9 837 aa14.14□□□□□ -0.15
SCN9A-204ENST00000452182 COL1A1P02452 1464 aaPredicted RBP14.13□□□□□ -0.15
SCN9A-204ENST00000452182 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 USP17L4A6NCW7 530 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
SCN9A-204ENST00000452182 GLRX3O76003 335 aaKnown RBP14.13□□□□□ -0.15
SCN9A-204ENST00000452182 FKBP1AP62942 108 aaKnown RBP14.13□□□□□ -0.15
SCN9A-204ENST00000452182 USP17L1Q7RTZ2 530 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 SPATA5Q8NB90 893 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 PI4K2BQ8TCG2 481 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 HMG20BQ9P0W2 317 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 IQSEC3Q9UPP2 1182 aaPredicted RBP14.13□□□□□ -0.15
SCN9A-204ENST00000452182 SALL1Q9NSC2 1324 aa14.13□□□□□ -0.15
SCN9A-204ENST00000452182 EIF6P56537 245 aaKnown RBP14.12□□□□□ -0.15
SCN9A-204ENST00000452182 CXCL9Q07325 125 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 SCARF1Q14162 830 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 WDR66Q8TBY9 1149 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 TBC1D22AQ8WUA7 517 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 HAUS7Q99871 368 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 IGSF3O75054 1194 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 VIL1P09327 827 aaKnown RBP14.12□□□□□ -0.15
SCN9A-204ENST00000452182 GTF2IP78347 998 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 TNIP1Q15025 636 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 DACT2Q5SW24 774 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 CIAPIN1Q6FI81 312 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 KCNQ5Q9NR82 932 aa14.12□□□□□ -0.15
SCN9A-204ENST00000452182 MYO3BQ8WXR4 1341 aa14.11□□□□□ -0.15
SCN9A-204ENST00000452182 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
SCN9A-204ENST00000452182 PSMD14O00487 310 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 RAD17O75943 681 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 ZAP70P43403 619 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 PI16Q6UXB8 463 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 GPC2Q8N158 579 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 BOLA2Q9H3K6 86 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 SUGT1Q9Y2Z0 365 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 ZNF541Q9H0D2 1346 aa14.1□□□□□ -0.15
SCN9A-204ENST00000452182 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
SCN9A-204ENST00000452182 RPS12P25398 132 aaKnown RBP14.09□□□□□ -0.15
SCN9A-204ENST00000452182 CHAF1AQ13111 956 aaPredicted RBP14.09□□□□□ -0.15
SCN9A-204ENST00000452182 TTF1Q15361 905 aaPredicted RBP14.09□□□□□ -0.15
SCN9A-204ENST00000452182 MFSD14BQ5SR56 506 aa14.09□□□□□ -0.15
SCN9A-204ENST00000452182 RSBN1LQ6PCB5 846 aaPredicted RBP14.09□□□□□ -0.15
SCN9A-204ENST00000452182 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
SCN9A-204ENST00000452182 SNRKQ9NRH2 765 aa14.09□□□□□ -0.15
SCN9A-204ENST00000452182 MMP14P50281 582 aa14.08□□□□□ -0.15
SCN9A-204ENST00000452182 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.15
SCN9A-204ENST00000452182 CERS5Q8N5B7 392 aa14.08□□□□□ -0.15
SCN9A-204ENST00000452182 GMLQ99445 158 aa14.08□□□□□ -0.15
SCN9A-204ENST00000452182 PAG1Q9NWQ8 432 aa14.08□□□□□ -0.15
SCN9A-204ENST00000452182 TTC22Q5TAA0 569 aa14.08□□□□□ -0.16
SCN9A-204ENST00000452182 SPTY2D1Q68D10 685 aaPredicted RBP14.08□□□□□ -0.16
SCN9A-204ENST00000452182 TMED8Q6PL24 325 aaPredicted RBP14.08□□□□□ -0.16
SCN9A-204ENST00000452182 DPF2Q92785 391 aa14.08□□□□□ -0.16
SCN9A-204ENST00000452182 FBXW7Q969H0 707 aa14.08□□□□□ -0.16
SCN9A-204ENST00000452182 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
SCN9A-204ENST00000452182 JAG2Q9Y219 1238 aa14.08□□□□□ -0.16
SCN9A-204ENST00000452182 MYO5AQ9Y4I1 1855 aaKnown RBP14.07□□□□□ -0.16
SCN9A-204ENST00000452182 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
SCN9A-204ENST00000452182 GOLIM4O00461 696 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms