RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 LPIN2Q92539 896 aa20.08■□□□□ 0.81
SCAMP4-205ENST00000452128 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
SCAMP4-205ENST00000452128 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
SCAMP4-205ENST00000452128 MTMR14Q8NCE2 650 aa20.07■□□□□ 0.8
SCAMP4-205ENST00000452128 CEP126Q9P2H0 1117 aa20.07■□□□□ 0.8
SCAMP4-205ENST00000452128 WNT10BO00744 389 aa20.06■□□□□ 0.8
SCAMP4-205ENST00000452128 NBPF9Q3BBW0 867 aa20.06■□□□□ 0.8
SCAMP4-205ENST00000452128 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
SCAMP4-205ENST00000452128 GRIK5Q16478 980 aa20.05■□□□□ 0.8
SCAMP4-205ENST00000452128 ITPRIPQ8IWB1 547 aa20.05■□□□□ 0.8
SCAMP4-205ENST00000452128 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 RASSF10A6NK89 507 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 IFIT1P09914 478 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 KRT26Q7Z3Y9 468 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 OGFOD1Q8N543 542 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 FBXW7Q969H0 707 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 GGA3Q9NZ52 723 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 JAG2Q9Y219 1238 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 CNTNAP1P78357 1384 aa20.04■□□□□ 0.8
SCAMP4-205ENST00000452128 ATP2B3Q16720 1220 aa20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 CAVIN4Q5BKX8 364 aa20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 ANGEL2Q5VTE6 544 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 ZBTB40Q9NUA8 1239 aa20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 NOP58Q9Y2X3 529 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 PCDHAC2Q9Y5I4 1007 aa20.03■□□□□ 0.8
SCAMP4-205ENST00000452128 ADM5C9JUS6 153 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 MS4A1P11836 297 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 SLC5A1P13866 664 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 TFCP2Q12800 502 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 MVPQ14764 893 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 MFSD14BQ5SR56 506 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 C20orf194Q5TEA3 1177 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 DCPSQ96C86 337 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 IQSEC3Q9UPP2 1182 aaPredicted RBP20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 TLL2Q9Y6L7 1015 aa20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 POLR2AP24928 1970 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-205ENST00000452128 AOX1Q06278 1338 aa20.02■□□□□ 0.79
SCAMP4-205ENST00000452128 CELF2O95319 508 aaKnown RBP20.01■□□□□ 0.79
SCAMP4-205ENST00000452128 ADORA1P30542 326 aa20.01■□□□□ 0.79
SCAMP4-205ENST00000452128 TIMM10P62072 90 aa20.01■□□□□ 0.79
SCAMP4-205ENST00000452128 PDE3AQ14432 1141 aa20.01■□□□□ 0.79
SCAMP4-205ENST00000452128 CEP85Q6P2H3 762 aa20.01■□□□□ 0.79
SCAMP4-205ENST00000452128 SAPCD2Q86UD0 394 aa20■□□□□ 0.79
SCAMP4-205ENST00000452128 PRMT6Q96LA8 375 aaPredicted RBP20■□□□□ 0.79
SCAMP4-205ENST00000452128 MRIQ9BWK5 157 aa20■□□□□ 0.79
SCAMP4-205ENST00000452128 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
SCAMP4-205ENST00000452128 HDAC9Q9UKV0 1011 aa20■□□□□ 0.79
SCAMP4-205ENST00000452128 COL1A1P02452 1464 aaPredicted RBP19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 PHKA1P46020 1223 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 VEGFBP49765 207 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 VPS37DQ86XT2 251 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 SIRT2Q8IXJ6 389 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 COG6Q9Y2V7 657 aa19.99■□□□□ 0.79
SCAMP4-205ENST00000452128 DEFB115Q30KQ5 88 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 CFAP100Q494V2 611 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 HHIPL1Q96JK4 782 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 SERPINA10Q9UK55 444 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 SCAF8Q9UPN6 1271 aaKnown RBP19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
SCAMP4-205ENST00000452128 A0A1B0GUL7 405 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 F8W031 263 aaPredicted RBP19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 CCDC102BQ68D86 513 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 CDCA5Q96FF9 252 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 GPR108Q9NPR9 543 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 AKAP2Q9Y2D5 859 aa19.97■□□□□ 0.79
SCAMP4-205ENST00000452128 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
SCAMP4-205ENST00000452128 CHAF1AQ13111 956 aaPredicted RBP19.96■□□□□ 0.79
SCAMP4-205ENST00000452128 G3BP1Q13283 466 aaKnown RBP eCLIP19.96■□□□□ 0.79
SCAMP4-205ENST00000452128 DDX19BQ9UMR2 479 aa19.96■□□□□ 0.79
SCAMP4-205ENST00000452128 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-205ENST00000452128 SEMA3EO15041 775 aa19.95■□□□□ 0.78
SCAMP4-205ENST00000452128 SALL1Q9NSC2 1324 aa19.95■□□□□ 0.78
SCAMP4-205ENST00000452128 SURF6O75683 361 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-205ENST00000452128 PRAMEF18Q5VWM3 479 aa19.94■□□□□ 0.78
SCAMP4-205ENST00000452128 WDR66Q8TBY9 1149 aa19.94■□□□□ 0.78
SCAMP4-205ENST00000452128 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-205ENST00000452128 PDS5AQ29RF7 1337 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-205ENST00000452128 CRKP46108 304 aa19.93■□□□□ 0.78
SCAMP4-205ENST00000452128 RASGRF1Q13972 1273 aa19.93■□□□□ 0.78
SCAMP4-205ENST00000452128 APOBEC3HQ6NTF7 200 aaKnown RBP19.93■□□□□ 0.78
SCAMP4-205ENST00000452128 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
SCAMP4-205ENST00000452128 GBA2Q9HCG7 927 aaPredicted RBP19.93■□□□□ 0.78
SCAMP4-205ENST00000452128 WDR33Q9C0J8 1336 aaKnown RBP19.93■□□□□ 0.78
SCAMP4-205ENST00000452128 FRAT2O75474 233 aaPredicted RBP19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 SPDYE2Q495Y8 402 aa19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 APOBEC3FQ8IUX4 373 aaKnown RBP19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 ZNF408Q9H9D4 720 aa19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 GNL3LQ9NVN8 582 aaKnown RBP19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 DENND2AQ9ULE3 1009 aa19.92■□□□□ 0.78
SCAMP4-205ENST00000452128 TNNI3KQ59H18 835 aa19.91■□□□□ 0.78
SCAMP4-205ENST00000452128 CYP4F22Q6NT55 531 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms