RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 UBE4AQ14139 1066 aa27.11■■□□□ 1.93
C9orf3-208ENST00000451893 METTL24Q5JXM2 366 aa27.11■■□□□ 1.93
C9orf3-208ENST00000451893 JAG2Q9Y219 1238 aa27.11■■□□□ 1.93
C9orf3-208ENST00000451893 PAPPA2Q9BXP8 1791 aa27.1■■□□□ 1.93
C9orf3-208ENST00000451893 FRAT2O75474 233 aaPredicted RBP27.1■■□□□ 1.93
C9orf3-208ENST00000451893 CT47B1P0C2W7 299 aaPredicted RBP27.1■■□□□ 1.93
C9orf3-208ENST00000451893 IL1R1P14778 569 aa27.1■■□□□ 1.93
C9orf3-208ENST00000451893 RBM5P52756 815 aaKnown RBP eCLIP27.1■■□□□ 1.93
C9orf3-208ENST00000451893 PRAMEF18Q5VWM3 479 aa27.09■■□□□ 1.93
C9orf3-208ENST00000451893 PUS3Q9BZE2 481 aaKnown RBP27.09■■□□□ 1.93
C9orf3-208ENST00000451893 HIBADHP31937 336 aaKnown RBP27.08■■□□□ 1.93
C9orf3-208ENST00000451893 KAZALD1Q96I82 304 aa27.08■■□□□ 1.93
C9orf3-208ENST00000451893 GYG1P46976 350 aa27.07■■□□□ 1.92
C9orf3-208ENST00000451893 CAVIN4Q5BKX8 364 aa27.07■■□□□ 1.92
C9orf3-208ENST00000451893 AKAP11Q9UKA4 1901 aa27.07■■□□□ 1.92
C9orf3-208ENST00000451893 KIF23Q02241 960 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-208ENST00000451893 RABL6Q3YEC7 729 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-208ENST00000451893 API5Q9BZZ5 524 aaKnown RBP27.06■■□□□ 1.92
C9orf3-208ENST00000451893 IRS2Q9Y4H2 1338 aa27.06■■□□□ 1.92
C9orf3-208ENST00000451893 SLC10A3P09131 477 aa27.05■■□□□ 1.92
C9orf3-208ENST00000451893 UBTFL1P0CB47 393 aaPredicted RBP27.05■■□□□ 1.92
C9orf3-208ENST00000451893 FKBP1AP62942 108 aaKnown RBP27.05■■□□□ 1.92
C9orf3-208ENST00000451893 ARMC9Q7Z3E5 817 aa27.05■■□□□ 1.92
C9orf3-208ENST00000451893 NOB1Q9ULX3 412 aaKnown RBP27.05■■□□□ 1.92
C9orf3-208ENST00000451893 HDAC5Q9UQL6 1122 aa27.05■■□□□ 1.92
C9orf3-208ENST00000451893 ECM29Q5VYK3 1845 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 FAM155AB1AL88 458 aaPredicted RBP27.04■■□□□ 1.92
C9orf3-208ENST00000451893 PRKG1Q13976 671 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 CFAP100Q494V2 611 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 MFSD14BQ5SR56 506 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 CERS5Q8N5B7 392 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 ANKRD44Q8N8A2 993 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 ZIC5Q96T25 663 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 USP44Q9H0E7 712 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 VEZTQ9HBM0 779 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 RIPOR2Q9Y4F9 1068 aa27.04■■□□□ 1.92
C9orf3-208ENST00000451893 UBE2Q2LH0YL09 131 aa27.03■■□□□ 1.92
C9orf3-208ENST00000451893 LRRC24Q50LG9 513 aa27.03■■□□□ 1.92
C9orf3-208ENST00000451893 MOB2Q70IA6 237 aa27.02■■□□□ 1.92
C9orf3-208ENST00000451893 RASAL3Q86YV0 1011 aa27.02■■□□□ 1.92
C9orf3-208ENST00000451893 TRMT2AQ8IZ69 625 aaKnown RBP27.02■■□□□ 1.92
C9orf3-208ENST00000451893 CASP8AP2Q9UKL3 1982 aa27.01■■□□□ 1.91
C9orf3-208ENST00000451893 CHAF1AQ13111 956 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-208ENST00000451893 REM2Q8IYK8 340 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-208ENST00000451893 KLHDC4Q8TBB5 520 aa27.01■■□□□ 1.91
C9orf3-208ENST00000451893 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-208ENST00000451893 TTF2Q9UNY4 1162 aaKnown RBP27.01■■□□□ 1.91
C9orf3-208ENST00000451893 COL1A1P02452 1464 aaPredicted RBP27■■□□□ 1.91
C9orf3-208ENST00000451893 KIF16BQ96L93 1317 aa27■■□□□ 1.91
C9orf3-208ENST00000451893 CLRN2A0PK11 232 aa27■■□□□ 1.91
C9orf3-208ENST00000451893 PDE8BO95263 885 aa27■■□□□ 1.91
C9orf3-208ENST00000451893 IFIT1P09914 478 aaKnown RBP27■■□□□ 1.91
C9orf3-208ENST00000451893 TDRD7Q8NHU6 1098 aaKnown RBP27■■□□□ 1.91
C9orf3-208ENST00000451893 FAM84BQ96KN1 310 aaPredicted RBP27■■□□□ 1.91
C9orf3-208ENST00000451893 IQSEC3Q9UPP2 1182 aaPredicted RBP27■■□□□ 1.91
C9orf3-208ENST00000451893 FAM205AQ6ZU69 1335 aa26.99■■□□□ 1.91
C9orf3-208ENST00000451893 MTMR14Q8NCE2 650 aa26.99■■□□□ 1.91
C9orf3-208ENST00000451893 DEFB129Q9H1M3 183 aa26.99■■□□□ 1.91
C9orf3-208ENST00000451893 SPDYE2BA6NHP3 402 aa26.98■■□□□ 1.91
C9orf3-208ENST00000451893 SPDYE6P0CI01 402 aa26.98■■□□□ 1.91
C9orf3-208ENST00000451893 PUM3Q15397 648 aaKnown RBP26.98■■□□□ 1.91
C9orf3-208ENST00000451893 SAGE1Q9NXZ1 904 aa26.98■■□□□ 1.91
C9orf3-208ENST00000451893 ANGEL1Q9UNK9 670 aaKnown RBP26.98■■□□□ 1.91
C9orf3-208ENST00000451893 PPP2R3BQ9Y5P8 575 aa26.98■■□□□ 1.91
C9orf3-208ENST00000451893 ARAP2Q8WZ64 1704 aa26.98■■□□□ 1.91
C9orf3-208ENST00000451893 TRPA1O75762 1119 aa26.97■■□□□ 1.91
C9orf3-208ENST00000451893 TBC1D22AQ8WUA7 517 aa26.97■■□□□ 1.91
C9orf3-208ENST00000451893 ZBED3Q96IU2 234 aaPredicted RBP26.97■■□□□ 1.91
C9orf3-208ENST00000451893 PPP1R12BO60237 982 aaPredicted RBP26.96■■□□□ 1.91
C9orf3-208ENST00000451893 SLC5A1P13866 664 aa26.96■■□□□ 1.91
C9orf3-208ENST00000451893 TNFAIP1Q13829 316 aa26.96■■□□□ 1.91
C9orf3-208ENST00000451893 MYH13Q9UKX3 1938 aa26.95■■□□□ 1.9
C9orf3-208ENST00000451893 EYA2O00167 538 aa26.95■■□□□ 1.9
C9orf3-208ENST00000451893 MKRN3Q13064 507 aaKnown RBP26.95■■□□□ 1.9
C9orf3-208ENST00000451893 SUPT20HL1Q3ZLR7 823 aa26.95■■□□□ 1.9
C9orf3-208ENST00000451893 ABHD8Q96I13 439 aa26.95■■□□□ 1.9
C9orf3-208ENST00000451893 PRMT6Q96LA8 375 aaPredicted RBP26.95■■□□□ 1.9
C9orf3-208ENST00000451893 SIL1Q9H173 461 aa26.95■■□□□ 1.9
C9orf3-208ENST00000451893 PCDHAC2Q9Y5I4 1007 aa26.95■■□□□ 1.9
C9orf3-208ENST00000451893 RARSP54136 660 aaKnown RBP26.94■■□□□ 1.9
C9orf3-208ENST00000451893 CSRNP1Q96S65 589 aa26.94■■□□□ 1.9
C9orf3-208ENST00000451893 RNF186Q9NXI6 227 aa26.94■■□□□ 1.9
C9orf3-208ENST00000451893 SERPINA10Q9UK55 444 aa26.94■■□□□ 1.9
C9orf3-208ENST00000451893 IPO8O15397 1037 aaKnown RBP26.93■■□□□ 1.9
C9orf3-208ENST00000451893 FBXO33Q7Z6M2 555 aa26.93■■□□□ 1.9
C9orf3-208ENST00000451893 BCAMP50895 628 aa26.92■■□□□ 1.9
C9orf3-208ENST00000451893 DGKZQ13574 1117 aa26.92■■□□□ 1.9
C9orf3-208ENST00000451893 FRAT1Q92837 279 aaPredicted RBP26.92■■□□□ 1.9
C9orf3-208ENST00000451893 LRRFIP2Q9Y608 721 aaKnown RBP26.92■■□□□ 1.9
C9orf3-208ENST00000451893 CRKP46108 304 aa26.91■■□□□ 1.9
C9orf3-208ENST00000451893 TNNI2P48788 182 aa26.91■■□□□ 1.9
C9orf3-208ENST00000451893 SREBF2Q12772 1141 aa26.91■■□□□ 1.9
C9orf3-208ENST00000451893 VGLL2Q8N8G2 317 aa26.91■■□□□ 1.9
C9orf3-208ENST00000451893 LPIN2Q92539 896 aa26.91■■□□□ 1.9
C9orf3-208ENST00000451893 CEP126Q9P2H0 1117 aa26.91■■□□□ 1.9
C9orf3-208ENST00000451893 CCDC85CA6NKD9 419 aa26.9■■□□□ 1.9
C9orf3-208ENST00000451893 PTPN12Q05209 780 aaKnown RBP26.9■■□□□ 1.9
C9orf3-208ENST00000451893 TDRD3Q9H7E2 651 aaKnown RBP26.9■■□□□ 1.9
C9orf3-208ENST00000451893 TMOD2Q9NZR1 351 aa26.9■■□□□ 1.9
C9orf3-208ENST00000451893 MAST3O60307 1309 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms