RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 DBNLQ9UJU6 430 aaKnown RBP20.27■□□□□ 0.83
ALMS1P1-202ENST00000450720 TTC39AQ5SRH9 613 aa20.26■□□□□ 0.83
ALMS1P1-202ENST00000450720 DACT2Q5SW24 774 aa20.26■□□□□ 0.83
ALMS1P1-202ENST00000450720 ARAP2Q8WZ64 1704 aa20.26■□□□□ 0.83
ALMS1P1-202ENST00000450720 L3MBTL3Q96JM7 780 aaPredicted RBP20.25■□□□□ 0.83
ALMS1P1-202ENST00000450720 IQCA1LA6NCM1 817 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 SCNN1DP51172 638 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 B4GALNT3Q6L9W6 998 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 VEGFAP15692 232 aaPredicted RBP20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 RPS12P25398 132 aaKnown RBP20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 RASGRF1Q13972 1273 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 MFSD14BQ5SR56 506 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 HACL1Q9UJ83 578 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
ALMS1P1-202ENST00000450720 UQCRFS1P1P0C7P4 283 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 EPS15P42566 896 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 MICALL2Q8IY33 904 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 AGBL3Q8NEM8 1001 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 GPRC5DQ9NZD1 345 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 FAM205AQ6ZU69 1335 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
ALMS1P1-202ENST00000450720 SHTN1A0MZ66 631 aa20.22■□□□□ 0.83
ALMS1P1-202ENST00000450720 F8W031 263 aaPredicted RBP20.22■□□□□ 0.83
ALMS1P1-202ENST00000450720 SEMA3EO15041 775 aa20.22■□□□□ 0.83
ALMS1P1-202ENST00000450720 CERS5Q8N5B7 392 aa20.22■□□□□ 0.83
ALMS1P1-202ENST00000450720 DPF2Q92785 391 aa20.22■□□□□ 0.83
ALMS1P1-202ENST00000450720 POTECB2RU33 542 aa20.21■□□□□ 0.83
ALMS1P1-202ENST00000450720 H7C1D1 291 aa20.21■□□□□ 0.83
ALMS1P1-202ENST00000450720 ARID4AP29374 1257 aaPredicted RBP20.21■□□□□ 0.83
ALMS1P1-202ENST00000450720 COL1A1P02452 1464 aaPredicted RBP20.21■□□□□ 0.83
ALMS1P1-202ENST00000450720 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
ALMS1P1-202ENST00000450720 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 EPHX2P34913 555 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 OGFOD1Q8N543 542 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 SPATA5Q8NB90 893 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 WDR66Q8TBY9 1149 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 TBC1D22AQ8WUA7 517 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 SNRKQ9NRH2 765 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 MCAMP43121 646 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 SCARF1Q14162 830 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 HMG20BQ9P0W2 317 aa20.2■□□□□ 0.82
ALMS1P1-202ENST00000450720 PSME4Q14997 1843 aa20.19■□□□□ 0.82
ALMS1P1-202ENST00000450720 GMLQ99445 158 aa20.19■□□□□ 0.82
ALMS1P1-202ENST00000450720 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
ALMS1P1-202ENST00000450720 FKBP1AP62942 108 aaKnown RBP20.18■□□□□ 0.82
ALMS1P1-202ENST00000450720 SAMD7Q7Z3H4 446 aa20.18■□□□□ 0.82
ALMS1P1-202ENST00000450720 LNPKQ9C0E8 428 aa20.18■□□□□ 0.82
ALMS1P1-202ENST00000450720 ADARB2Q9NS39 739 aaKnown RBP20.18■□□□□ 0.82
ALMS1P1-202ENST00000450720 ABCF2Q9UG63 623 aa20.18■□□□□ 0.82
ALMS1P1-202ENST00000450720 HDAC9Q9UKV0 1011 aa20.18■□□□□ 0.82
ALMS1P1-202ENST00000450720 TBC1D10BQ4KMP7 808 aaPredicted RBP20.17■□□□□ 0.82
ALMS1P1-202ENST00000450720 GPATCH3Q96I76 525 aa20.17■□□□□ 0.82
ALMS1P1-202ENST00000450720 TTF2Q9UNY4 1162 aaKnown RBP20.17■□□□□ 0.82
ALMS1P1-202ENST00000450720 GRIK5Q16478 980 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 ZNF512BQ96KM6 892 aaPredicted RBP20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 NDUFB9Q9Y6M9 179 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 MYH13Q9UKX3 1938 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 PDS5AQ29RF7 1337 aaKnown RBP20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 KIF3CO14782 793 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 TSHZ3Q63HK5 1081 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 TBC1D9Q6ZT07 1266 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 PNMA8AQ86V59 439 aaPredicted RBP20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 ZGPATQ8N5A5 531 aaKnown RBP20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 OTUD7AQ8TE49 926 aaPredicted RBP20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 ZNF646O15015 1829 aaPredicted RBP20.16■□□□□ 0.82
ALMS1P1-202ENST00000450720 SCN4AP35499 1836 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 EGFRP00533 1210 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 LDHBP07195 334 aaKnown RBP20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 PRDX5P30044 214 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 ZAP70P43403 619 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 RBM5P52756 815 aaKnown RBP eCLIP20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 NUCB1Q02818 461 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 CHD1LQ86WJ1 897 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 TRPM4Q8TD43 1214 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 DNAJC2Q99543 621 aaKnown RBP20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 MYOZ2Q9NPC6 264 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 ECHDC1Q9NTX5 307 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 CLEC11AQ9Y240 323 aa20.15■□□□□ 0.82
ALMS1P1-202ENST00000450720 ZNF280AP59817 542 aaPredicted RBP20.14■□□□□ 0.81
ALMS1P1-202ENST00000450720 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
ALMS1P1-202ENST00000450720 SALL1Q9NSC2 1324 aa20.14■□□□□ 0.81
ALMS1P1-202ENST00000450720 POTEIP0CG38 1075 aa20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 POTEJP0CG39 1038 aa20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 USP50Q70EL3 339 aaPredicted RBP20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 LRP2BPQ9P2M1 347 aa20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 ZBTB22O15209 634 aa20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 ATP5JP18859 108 aa20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 MX1P20591 662 aa20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 SPTY2D1Q68D10 685 aaPredicted RBP20.13■□□□□ 0.81
ALMS1P1-202ENST00000450720 DZIP1Q86YF9 867 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms