RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CYLC1P35663 651 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 EPS15P42566 896 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 NMIQ13287 307 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 TAF7Q15545 349 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 SPDYE2Q495Y8 402 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ANO6Q4KMQ2 910 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ARMCX6Q7L4S7 300 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MAATS1Q7Z4T9 603 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 LCA5Q86VQ0 697 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 EGFL6Q8IUX8 553 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CCDC110Q8TBZ0 833 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 KIAA1524Q8TCG1 905 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ZNF483Q8TF39 744 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 SREK1Q8WXA9 508 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 ATRIPQ8WXE1 791 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 UTP6Q9NYH9 597 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 BCAP29Q9UHQ4 241 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ADGRL1O94910 1474 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CFAP74Q9C0B2 1584 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CPLX1O14810 134 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CASQ2O14958 399 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 HIP1RO75146 1068 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 BLVRAP53004 296 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CAPRIN2Q6IMN6 1127 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 RCSD1Q6JBY9 416 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CHRDL2Q6WN34 429 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CPLX4Q7Z7G2 160 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ZNF513Q8N8E2 541 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 CTNNBL1Q8WYA6 563 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 SPDL1Q96EA4 605 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 HOOK2Q96ED9 719 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 SPAG5Q96R06 1193 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 BAG1Q99933 345 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 TUBB6Q9BUF5 446 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 VIPAS39Q9H9C1 493 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 RBM27Q9P2N5 1060 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 MLH3Q9UHC1 1453 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 RAD54L2Q9Y4B4 1467 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 SAMD9Q5K651 1589 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 TTC37Q6PGP7 1564 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ENO4A6NNW6 628 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 SPECC1L-ADORA2AF8WAN1 911 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 APAF1O14727 1248 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CETN3O15182 167 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 F13A1P00488 732 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 PNMA6AP0CW24 399 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 CCT6AP40227 531 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 CCT4P50991 539 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 ADCY2Q08462 1091 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 GJC2Q5T442 439 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 INTS8Q75QN2 995 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 TAOK1Q7L7X3 1001 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 FAM186BQ8IYM0 893 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CNNM3Q8NE01 707 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 HAUS1Q96CS2 278 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 PPP1R12CQ9BZL4 782 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 TSPYL2Q9H2G4 693 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 CLSTN2Q9H4D0 955 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ESF1Q9H501 851 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 CNOT10Q9H9A5 744 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 IL1RAPL1Q9NZN1 696 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ORC3Q9UBD5 711 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 NUP155O75694 1391 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 STMN1P16949 149 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 RANBP1P43487 201 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 MAP3K7CLP57077 242 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 TNNC1P63316 161 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 RNASELQ05823 741 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 IKQ13123 557 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 PAK2Q13177 524 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CCDC27Q2M243 656 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 HDGFL1Q5TGJ6 251 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ALS2CLQ60I27 953 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 USP48Q86UV5 1035 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CNGA4Q8IV77 575 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 IFT20Q8IY31 132 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 AMOTL1Q8IY63 956 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 THOC1Q96FV9 657 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 JPH2Q9BR39 696 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 EIF2AQ9BY44 585 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 TRMT1Q9NXH9 659 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 IQSEC3Q9UPP2 1182 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 PLEKHG2Q9H7P9 1386 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 NAIPQ13075 1403 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 AOX1Q06278 1338 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 MSH6P52701 1360 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 H0YC42 278 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 KRT86O43790 486 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 RAB11FIP3O75154 756 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ATP5HO75947 161 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 SLFN14P0C7P3 912 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CHGAP10645 457 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 SYT1P21579 422 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 VASPP50552 380 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 TPD52P55327 224 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 PRPF4BQ13523 1007 aaKnown RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 MUM1Q2TAK8 710 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 SLC4A8Q2Y0W8 1093 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 DUSP27Q5VZP5 1158 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 CC2D2BQ6DHV5 1058 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms