RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TM6SF1Q9BZW5 370 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 FAM204AQ9H8W3 233 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 TPCN1Q9ULQ1 816 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 PIK3C2BO00750 1634 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 KINO60870 393 aaKnown RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 PHACTR2O75167 634 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 MAP4K4O95819 1239 aaPredicted RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 GNAI2P04899 355 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 HSP90B1P14625 803 aaKnown RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 SCP2P22307 547 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 GNG11P61952 73 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 SETQ01105 290 aaPredicted RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 MAP9Q49MG5 647 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 FBXW10Q5XX13 1052 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 TMED8Q6PL24 325 aaPredicted RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 GBP6Q6ZN66 633 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 FCHSD1Q86WN1 690 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 GIMAP7Q8NHV1 300 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 UTP14AQ9BVJ6 771 aaKnown RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 SPG7Q9UQ90 795 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 ZFYVE9O95405 1425 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 PREX1Q8TCU6 1659 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 EXOC5O00471 708 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 CCDC73Q6ZRK6 1079 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 CCAR1Q8IX12 1150 aaKnown RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 STAG1Q8WVM7 1258 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 A1CFQ9NQ94 594 aaKnown RBP9.93□□□□□ -0.82
LSM5-208ENST00000450169 STK26Q9P289 416 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 CFAP45Q9UL16 551 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 L1RE1Q9UN81 338 aa9.93□□□□□ -0.82
LSM5-208ENST00000450169 GOLGA6L9A6NEM1 432 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 POTEB2H3BUK9 544 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 KIF3CO14782 793 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 OSBPP22059 807 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 TBC1D22AQ8WUA7 517 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 DHX58Q96C10 678 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 ANKZF1Q9H8Y5 726 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 GNL3LQ9NVN8 582 aaKnown RBP9.92□□□□□ -0.82
LSM5-208ENST00000450169 RAB21Q9UL25 225 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 PPP2R2CQ9Y2T4 447 aa9.92□□□□□ -0.82
LSM5-208ENST00000450169 TMEM132EQ6IEE7 984 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
LSM5-208ENST00000450169 SLC4A10Q6U841 1118 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 JPH2Q9BR39 696 aaPredicted RBP9.91□□□□□ -0.82
LSM5-208ENST00000450169 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 GOLPH3LQ9H4A5 285 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 SETD1AO15047 1707 aaKnown RBP9.91□□□□□ -0.82
LSM5-208ENST00000450169 PNMA6EA0A0J9YXQ4 647 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 FAM83GA6ND36 823 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
LSM5-208ENST00000450169 CASP8Q14790 479 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 SKIDA1Q1XH10 827 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 WWC2Q6AWC2 1192 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 JMYQ8N9B5 988 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 MIEF2Q96C03 454 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 BPIFA3Q9BQP9 254 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 ZSWIM4Q9H7M6 989 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
LSM5-208ENST00000450169 SUGCTQ9HAC7 445 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 ABCB6Q9NP58 842 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 MYO5BQ9ULV0 1848 aa9.91□□□□□ -0.82
LSM5-208ENST00000450169 ELF1P32519 619 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 FAM160A1Q05DH4 1040 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 RESTQ13127 1097 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 NEDD9Q14511 834 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 CPLX2Q6PUV4 134 aaKnown RBP9.9□□□□□ -0.82
LSM5-208ENST00000450169 SRGAP1Q7Z6B7 1085 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 NUTM1Q86Y26 1132 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 KCTD17Q8N5Z5 321 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 MSANTD4Q8NCY6 345 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 AFAP1L1Q8TED9 768 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 DDX12PQ92771 950 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 ERCC4Q92889 916 aaPredicted RBP9.9□□□□□ -0.82
LSM5-208ENST00000450169 PNKPQ96T60 521 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 FAM169AQ9Y6X4 670 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 CD163L1Q9NR16 1453 aa9.9□□□□□ -0.82
LSM5-208ENST00000450169 CHD2O14647 1828 aaKnown RBP9.9□□□□□ -0.82
LSM5-208ENST00000450169 ARHGAP6O43182 974 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 RAB11FIP3O75154 756 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 ZKSCAN1P17029 563 aaPredicted RBP9.9□□□□□ -0.83
LSM5-208ENST00000450169 GPTP24298 496 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 CEBPZQ03701 1054 aaKnown RBP9.9□□□□□ -0.83
LSM5-208ENST00000450169 SCRN1Q12765 414 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 BIRC2Q13490 618 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 DPCR1Q3MIW9 517 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 PI4K2BQ8TCG2 481 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.83
LSM5-208ENST00000450169 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 CLIC6Q96NY7 704 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 IL1RAPL2Q9NP60 686 aa9.9□□□□□ -0.83
LSM5-208ENST00000450169 EBAG9O00559 213 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 RNF40O75150 1001 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms