RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 CERS5Q8N5B7 392 aa21.75■■□□□ 1.07
CLTCL1-203ENST00000449918 THSD7BQ9C0I4 1608 aa21.75■■□□□ 1.07
CLTCL1-203ENST00000449918 UBTFL1P0CB47 393 aaPredicted RBP21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 NF2P35240 595 aa21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 GYG1P46976 350 aa21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 RARSP54136 660 aaKnown RBP21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 LRRC24Q50LG9 513 aa21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 VPS37DQ86XT2 251 aa21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 MTMR14Q8NCE2 650 aa21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 TDRD7Q8NHU6 1098 aaKnown RBP21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 FAM84BQ96KN1 310 aaPredicted RBP21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 SCAF8Q9UPN6 1271 aaKnown RBP21.74■■□□□ 1.07
CLTCL1-203ENST00000449918 FAM155AB1AL88 458 aaPredicted RBP21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 F8W031 263 aaPredicted RBP21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 PDE8BO95263 885 aa21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 CAVIN4Q5BKX8 364 aa21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 ZBED3Q96IU2 234 aaPredicted RBP21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 FAM205AQ6ZU69 1335 aa21.73■■□□□ 1.07
CLTCL1-203ENST00000449918 MYO1BO43795 1136 aa21.72■■□□□ 1.07
CLTCL1-203ENST00000449918 PRAMEF18Q5VWM3 479 aa21.72■■□□□ 1.07
CLTCL1-203ENST00000449918 KLHDC4Q8TBB5 520 aa21.72■■□□□ 1.07
CLTCL1-203ENST00000449918 JAG2Q9Y219 1238 aa21.72■■□□□ 1.07
CLTCL1-203ENST00000449918 KIF16BQ96L93 1317 aa21.72■■□□□ 1.07
CLTCL1-203ENST00000449918 MIER1Q8N108 512 aa21.71■■□□□ 1.07
CLTCL1-203ENST00000449918 IPO8O15397 1037 aaKnown RBP21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 SLC10A3P09131 477 aa21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 TTLL12Q14166 644 aaPredicted RBP21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 CFAP100Q494V2 611 aa21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 MFSD14BQ5SR56 506 aa21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 FBXO33Q7Z6M2 555 aa21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 VGLL2Q8N8G2 317 aa21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 ZNF646O15015 1829 aaPredicted RBP21.7■■□□□ 1.06
CLTCL1-203ENST00000449918 A0A1B0GUL6 1792 aa21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 EYA2O00167 538 aa21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 FRAT2O75474 233 aaPredicted RBP21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 RBM5P52756 815 aaKnown RBP eCLIP21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 KIF23Q02241 960 aaPredicted RBP21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 PUM3Q15397 648 aaKnown RBP21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 ZIC5Q96T25 663 aa21.69■■□□□ 1.06
CLTCL1-203ENST00000449918 SPDYE2BA6NHP3 402 aa21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 UBE2Q2LH0YL09 131 aa21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 CAPN15O75808 1086 aa21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 IFIT1P09914 478 aaKnown RBP21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 SPDYE6P0CI01 402 aa21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 REM2Q8IYK8 340 aaPredicted RBP21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 DEFB129Q9H1M3 183 aa21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 TSKSQ9UJT2 592 aa21.68■■□□□ 1.06
CLTCL1-203ENST00000449918 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 MOB2Q70IA6 237 aa21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 ARMC9Q7Z3E5 817 aa21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 PRMT6Q96LA8 375 aaPredicted RBP21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 TTF2Q9UNY4 1162 aaKnown RBP21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 PPP2R3BQ9Y5P8 575 aa21.67■■□□□ 1.06
CLTCL1-203ENST00000449918 PAPPA2Q9BXP8 1791 aa21.66■■□□□ 1.06
CLTCL1-203ENST00000449918 INTS3Q68E01 1043 aaKnown RBP21.66■■□□□ 1.06
CLTCL1-203ENST00000449918 RASAL3Q86YV0 1011 aa21.66■■□□□ 1.06
CLTCL1-203ENST00000449918 TBC1D22AQ8WUA7 517 aa21.66■■□□□ 1.06
CLTCL1-203ENST00000449918 SERPINA10Q9UK55 444 aa21.66■■□□□ 1.06
CLTCL1-203ENST00000449918 COL1A1P02452 1464 aaPredicted RBP21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 CIAO1O76071 339 aa21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 SLC5A1P13866 664 aa21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 FGFR2P21802 821 aa21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 LPIN2Q92539 896 aa21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 PCDHAC2Q9Y5I4 1007 aa21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 LRRFIP2Q9Y608 721 aaKnown RBP21.65■■□□□ 1.06
CLTCL1-203ENST00000449918 CLRN2A0PK11 232 aa21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 GNAI3P08754 354 aa21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 BCAMP50895 628 aa21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 CHAF1AQ13111 956 aaPredicted RBP21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 VEZTQ9HBM0 779 aa21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 SAGE1Q9NXZ1 904 aa21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 IQSEC3Q9UPP2 1182 aaPredicted RBP21.64■■□□□ 1.05
CLTCL1-203ENST00000449918 SUPT20HL1Q3ZLR7 823 aa21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 ATG9AQ7Z3C6 839 aa21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 FRAT1Q92837 279 aaPredicted RBP21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 CSRNP1Q96S65 589 aa21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 MEIS3Q99687 375 aa21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 SIL1Q9H173 461 aa21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 CEP126Q9P2H0 1117 aa21.63■■□□□ 1.05
CLTCL1-203ENST00000449918 PPP1R12BO60237 982 aaPredicted RBP21.62■■□□□ 1.05
CLTCL1-203ENST00000449918 TNFAIP1Q13829 316 aa21.62■■□□□ 1.05
CLTCL1-203ENST00000449918 PRKG1Q13976 671 aa21.62■■□□□ 1.05
CLTCL1-203ENST00000449918 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
CLTCL1-203ENST00000449918 BCAR3O75815 825 aa21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 CRKP46108 304 aa21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 HDLBPQ00341 1268 aaKnown RBP21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 DZIP1LQ8IYY4 767 aaKnown RBP21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 RNF186Q9NXI6 227 aa21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 ANGEL1Q9UNK9 670 aaKnown RBP21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 SUGT1Q9Y2Z0 365 aa21.61■■□□□ 1.05
CLTCL1-203ENST00000449918 TRIM27P14373 513 aa21.6■■□□□ 1.05
CLTCL1-203ENST00000449918 RASA3Q14644 834 aa21.6■■□□□ 1.05
CLTCL1-203ENST00000449918 SPDYE2Q495Y8 402 aa21.6■■□□□ 1.05
CLTCL1-203ENST00000449918 COPRSQ9NQ92 184 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms