RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 FKBP1BP68106 108 aa24.68■■□□□ 1.54
VCP-203ENST00000448530 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
VCP-203ENST00000448530 VPS37DQ86XT2 251 aa24.68■■□□□ 1.54
VCP-203ENST00000448530 APOBEC3FQ8IUX4 373 aaKnown RBP24.68■■□□□ 1.54
VCP-203ENST00000448530 SCAF8Q9UPN6 1271 aaKnown RBP24.68■■□□□ 1.54
VCP-203ENST00000448530 HDAC5Q9UQL6 1122 aa24.68■■□□□ 1.54
VCP-203ENST00000448530 F8W031 263 aaPredicted RBP24.67■■□□□ 1.54
VCP-203ENST00000448530 CA12O43570 354 aa24.67■■□□□ 1.54
VCP-203ENST00000448530 UBTFL1P0CB47 393 aaPredicted RBP24.67■■□□□ 1.54
VCP-203ENST00000448530 GYG1P46976 350 aa24.67■■□□□ 1.54
VCP-203ENST00000448530 LRRC24Q50LG9 513 aa24.67■■□□□ 1.54
VCP-203ENST00000448530 CERS5Q8N5B7 392 aa24.67■■□□□ 1.54
VCP-203ENST00000448530 JAG2Q9Y219 1238 aa24.67■■□□□ 1.54
VCP-203ENST00000448530 KIF16BQ96L93 1317 aa24.66■■□□□ 1.54
VCP-203ENST00000448530 RARSP54136 660 aaKnown RBP24.66■■□□□ 1.54
VCP-203ENST00000448530 PAPPA2Q9BXP8 1791 aa24.66■■□□□ 1.54
VCP-203ENST00000448530 MYO1BO43795 1136 aa24.65■■□□□ 1.54
VCP-203ENST00000448530 CAPN15O75808 1086 aa24.65■■□□□ 1.54
VCP-203ENST00000448530 TTLL12Q14166 644 aaPredicted RBP24.65■■□□□ 1.54
VCP-203ENST00000448530 CAVIN4Q5BKX8 364 aa24.65■■□□□ 1.54
VCP-203ENST00000448530 TDRD7Q8NHU6 1098 aaKnown RBP24.65■■□□□ 1.54
VCP-203ENST00000448530 KLHDC4Q8TBB5 520 aa24.65■■□□□ 1.54
VCP-203ENST00000448530 FAM84BQ96KN1 310 aaPredicted RBP24.65■■□□□ 1.54
VCP-203ENST00000448530 FAM205AQ6ZU69 1335 aa24.64■■□□□ 1.54
VCP-203ENST00000448530 PDE8BO95263 885 aa24.64■■□□□ 1.54
VCP-203ENST00000448530 PRAMEF18Q5VWM3 479 aa24.64■■□□□ 1.54
VCP-203ENST00000448530 MIER1Q8N108 512 aa24.64■■□□□ 1.54
VCP-203ENST00000448530 FRAT2O75474 233 aaPredicted RBP24.63■■□□□ 1.53
VCP-203ENST00000448530 RBM5P52756 815 aaKnown RBP eCLIP24.63■■□□□ 1.53
VCP-203ENST00000448530 MFSD14BQ5SR56 506 aa24.63■■□□□ 1.53
VCP-203ENST00000448530 MTMR14Q8NCE2 650 aa24.63■■□□□ 1.53
VCP-203ENST00000448530 ZBED3Q96IU2 234 aaPredicted RBP24.63■■□□□ 1.53
VCP-203ENST00000448530 FAM155AB1AL88 458 aaPredicted RBP24.62■■□□□ 1.53
VCP-203ENST00000448530 CFAP100Q494V2 611 aa24.62■■□□□ 1.53
VCP-203ENST00000448530 ARHGAP45Q92619 1136 aa24.62■■□□□ 1.53
VCP-203ENST00000448530 TSKSQ9UJT2 592 aa24.62■■□□□ 1.53
VCP-203ENST00000448530 ECM29Q5VYK3 1845 aa24.62■■□□□ 1.53
VCP-203ENST00000448530 IPO8O15397 1037 aaKnown RBP24.61■■□□□ 1.53
VCP-203ENST00000448530 SLC10A3P09131 477 aa24.61■■□□□ 1.53
VCP-203ENST00000448530 EYA2O00167 538 aa24.6■■□□□ 1.53
VCP-203ENST00000448530 IFIT1P09914 478 aaKnown RBP24.6■■□□□ 1.53
VCP-203ENST00000448530 HNRNPUQ00839 825 aaKnown RBP eCLIP24.6■■□□□ 1.53
VCP-203ENST00000448530 KIF23Q02241 960 aaPredicted RBP24.6■■□□□ 1.53
VCP-203ENST00000448530 PUM3Q15397 648 aaKnown RBP24.6■■□□□ 1.53
VCP-203ENST00000448530 VGLL2Q8N8G2 317 aa24.6■■□□□ 1.53
VCP-203ENST00000448530 ZIC5Q96T25 663 aa24.6■■□□□ 1.53
VCP-203ENST00000448530 COL1A1P02452 1464 aaPredicted RBP24.59■■□□□ 1.53
VCP-203ENST00000448530 SPDYE2BA6NHP3 402 aa24.59■■□□□ 1.53
VCP-203ENST00000448530 UBE2Q2LH0YL09 131 aa24.59■■□□□ 1.53
VCP-203ENST00000448530 SPDYE6P0CI01 402 aa24.59■■□□□ 1.53
VCP-203ENST00000448530 MOB2Q70IA6 237 aa24.59■■□□□ 1.53
VCP-203ENST00000448530 FBXO33Q7Z6M2 555 aa24.59■■□□□ 1.53
VCP-203ENST00000448530 TTF2Q9UNY4 1162 aaKnown RBP24.59■■□□□ 1.53
VCP-203ENST00000448530 IQSEC3Q9UPP2 1182 aaPredicted RBP24.59■■□□□ 1.53
VCP-203ENST00000448530 RFX5P48382 616 aaPredicted RBP24.58■■□□□ 1.53
VCP-203ENST00000448530 PTPN12Q05209 780 aaKnown RBP24.58■■□□□ 1.53
VCP-203ENST00000448530 CHAF1AQ13111 956 aaPredicted RBP24.58■■□□□ 1.53
VCP-203ENST00000448530 ARMC9Q7Z3E5 817 aa24.58■■□□□ 1.53
VCP-203ENST00000448530 DEFB129Q9H1M3 183 aa24.58■■□□□ 1.53
VCP-203ENST00000448530 LRRFIP2Q9Y608 721 aaKnown RBP24.58■■□□□ 1.53
VCP-203ENST00000448530 ARAP2Q8WZ64 1704 aa24.58■■□□□ 1.52
VCP-203ENST00000448530 CLRN2A0PK11 232 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 SLC5A1P13866 664 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 RASAL3Q86YV0 1011 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 REM2Q8IYK8 340 aaPredicted RBP24.57■■□□□ 1.52
VCP-203ENST00000448530 TBC1D22AQ8WUA7 517 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 PRMT6Q96LA8 375 aaPredicted RBP24.57■■□□□ 1.52
VCP-203ENST00000448530 SIL1Q9H173 461 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 VEZTQ9HBM0 779 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 PCDHAC2Q9Y5I4 1007 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 PPP2R3BQ9Y5P8 575 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 AKAP11Q9UKA4 1901 aa24.57■■□□□ 1.52
VCP-203ENST00000448530 GNAI3P08754 354 aa24.56■■□□□ 1.52
VCP-203ENST00000448530 PRKG1Q13976 671 aa24.56■■□□□ 1.52
VCP-203ENST00000448530 INTS3Q68E01 1043 aaKnown RBP24.56■■□□□ 1.52
VCP-203ENST00000448530 FRAT1Q92837 279 aaPredicted RBP24.56■■□□□ 1.52
VCP-203ENST00000448530 SERPINA10Q9UK55 444 aa24.56■■□□□ 1.52
VCP-203ENST00000448530 FBXO3Q9UK99 471 aa24.56■■□□□ 1.52
VCP-203ENST00000448530 BCAMP50895 628 aa24.55■■□□□ 1.52
VCP-203ENST00000448530 LPIN2Q92539 896 aa24.55■■□□□ 1.52
VCP-203ENST00000448530 MEIS3Q99687 375 aa24.55■■□□□ 1.52
VCP-203ENST00000448530 CIAO1O76071 339 aa24.54■■□□□ 1.52
VCP-203ENST00000448530 FGFR2P21802 821 aa24.54■■□□□ 1.52
VCP-203ENST00000448530 CEP126Q9P2H0 1117 aa24.54■■□□□ 1.52
VCP-203ENST00000448530 SUPT20HL1Q3ZLR7 823 aa24.53■■□□□ 1.52
VCP-203ENST00000448530 ATG9AQ7Z3C6 839 aa24.53■■□□□ 1.52
VCP-203ENST00000448530 SAGE1Q9NXZ1 904 aa24.53■■□□□ 1.52
VCP-203ENST00000448530 ANGEL1Q9UNK9 670 aaKnown RBP24.53■■□□□ 1.52
VCP-203ENST00000448530 PPP1R12BO60237 982 aaPredicted RBP24.52■■□□□ 1.52
VCP-203ENST00000448530 BCAR3O75815 825 aa24.52■■□□□ 1.52
VCP-203ENST00000448530 CRKP46108 304 aa24.52■■□□□ 1.52
VCP-203ENST00000448530 TNFAIP1Q13829 316 aa24.52■■□□□ 1.52
VCP-203ENST00000448530 ATF7IPQ6VMQ6 1270 aa24.52■■□□□ 1.52
VCP-203ENST00000448530 CSRNP1Q96S65 589 aa24.52■■□□□ 1.52
VCP-203ENST00000448530 MYH13Q9UKX3 1938 aa24.52■■□□□ 1.52
VCP-203ENST00000448530 CASP8AP2Q9UKL3 1982 aa24.51■■□□□ 1.51
VCP-203ENST00000448530 TRIM27P14373 513 aa24.51■■□□□ 1.51
VCP-203ENST00000448530 IL15P40933 162 aaPredicted RBP24.51■■□□□ 1.51
VCP-203ENST00000448530 ATP2B3Q16720 1220 aa24.51■■□□□ 1.51
VCP-203ENST00000448530 TRPA1O75762 1119 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms