RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RHOXF2Q9BQY4 288 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 CRB1P82279 1406 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 EIF4A2Q14240 407 aaKnown RBP10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 IKBKBO14920 756 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 GUCY1B3Q02153 619 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 PLEKHO1Q53GL0 409 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 Q6ZUG5 572 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 TOGARAM2Q6ZUX3 1019 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 KAT2BQ92831 832 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 PTPRMP28827 1452 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 TMEM232C9JQI7 657 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 SATB1Q01826 763 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 TMEM139Q8IV31 216 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 MSANTD4Q8NCY6 345 aa10.82□□□□□ -0.68
SYNPO2-204ENST00000448416 SETQ01105 290 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 HMG20BQ9P0W2 317 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 LMTK2Q8IWU2 1503 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 STX10O60499 249 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 RNF40O75150 1001 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 STK38Q15208 465 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 FBXW10Q5XX13 1052 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 NEK1Q96PY6 1258 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 DESI2Q9BSY9 194 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 EXOC5O00471 708 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 FOXO3O43524 673 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 VSNL1P62760 191 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 SCRN1Q12765 414 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 MTX1Q13505 466 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 CDC23Q9UJX2 597 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 IDI1Q13907 227 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 KRT32Q14532 448 aa10.81□□□□□ -0.68
SYNPO2-204ENST00000448416 A0A1W2PQ27 194 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 A0A1W2PQ64 194 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 A0A1W2PQD8 194 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 EBAG9O00559 213 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 MYL5Q02045 173 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 FSD1Q9BTV5 496 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 ZNF202O95125 648 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 CCT5P48643 541 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 ADKP55263 362 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 TUBB4BP68371 445 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 CNPY4Q8N129 248 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 SMARCC2Q8TAQ2 1214 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 LRRC2Q9BYS8 371 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 LZTFL1Q9NQ48 299 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 NEXMIFQ5QGS0 1516 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 KIF4BQ2VIQ3 1234 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 SMARCC1Q92922 1105 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 HSD3B7Q9H2F3 369 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 BCCIPQ9P287 314 aaKnown RBP eCLIP10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 FAM169AQ9Y6X4 670 aa10.8□□□□□ -0.68
SYNPO2-204ENST00000448416 CLTCQ00610 1675 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 NPHP4O75161 1426 aaPredicted RBP10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 LRRIQ3A6PVS8 624 aaPredicted RBP10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 GBP6Q6ZN66 633 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 RPAINQ86UA6 219 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 AACSQ86V21 672 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 GIMAP7Q8NHV1 300 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 PTPDC1A2A3K4 754 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 KIF5CO60282 957 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 NSUN7Q8NE18 718 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 CLIC6Q96NY7 704 aa10.79□□□□□ -0.68
SYNPO2-204ENST00000448416 CCDC175P0C221 793 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 INPP5BP32019 993 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 JPH2Q9BR39 696 aaPredicted RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 MRPL44Q9H9J2 332 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 FANCLQ9NW38 375 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 RTEL1Q9NZ71 1219 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 RAI14Q9P0K7 980 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 EDC4Q6P2E9 1401 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CTAGE15A4D2H0 777 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 TUBBP07437 444 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CTAGE8P0CG41 777 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CCT2P78371 535 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 HSP90AA4PQ58FG1 418 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CTAGE6Q86UF2 777 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CTAGE4Q8IX94 777 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CTCFLQ8NI51 663 aaPredicted RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 ZNF569Q5MCW4 686 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 OLFM4Q6UX06 510 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 POTEDQ86YR6 584 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 LINC00301Q8NCQ3 95 aa10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 SEC62Q99442 399 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 PHAXQ9H814 394 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-204ENST00000448416 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.68
SYNPO2-204ENST00000448416 MTHFSDQ2M296 383 aaKnown RBP10.77□□□□□ -0.68
SYNPO2-204ENST00000448416 ZNF589Q86UQ0 364 aaPredicted RBP10.77□□□□□ -0.68
SYNPO2-204ENST00000448416 TC2NQ8N9U0 490 aa10.77□□□□□ -0.68
SYNPO2-204ENST00000448416 KCNG4Q8TDN1 519 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms