RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 TRMT2AQ8IZ69 625 aaKnown RBP13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 SPEF2Q9C093 1822 aa13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 CAPN15O75808 1086 aa13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
NPIPB3-202ENST00000448012 GYG1P46976 350 aa13.69□□□□□ -0.22
NPIPB3-202ENST00000448012 ARMC9Q7Z3E5 817 aa13.69□□□□□ -0.22
NPIPB3-202ENST00000448012 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
NPIPB3-202ENST00000448012 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
NPIPB3-202ENST00000448012 RIPOR2Q9Y4F9 1068 aa13.69□□□□□ -0.22
NPIPB3-202ENST00000448012 SCN9AQ15858 1988 aa13.69□□□□□ -0.22
NPIPB3-202ENST00000448012 PDE8BO95263 885 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 SLC5A1P13866 664 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 RARSP54136 660 aaKnown RBP13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 CFAP100Q494V2 611 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 MFSD14BQ5SR56 506 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 JAG2Q9Y219 1238 aa13.68□□□□□ -0.22
NPIPB3-202ENST00000448012 EYA2O00167 538 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 GNAI3P08754 354 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 CHAF1AQ13111 956 aaPredicted RBP13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 LRRC24Q50LG9 513 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 MTMR14Q8NCE2 650 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 VEZTQ9HBM0 779 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 TTF2Q9UNY4 1162 aaKnown RBP13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 PPP2R3BQ9Y5P8 575 aa13.67□□□□□ -0.22
NPIPB3-202ENST00000448012 FAM205AQ6ZU69 1335 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 IRS2Q9Y4H2 1338 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 SLC10A3P09131 477 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 TNFAIP1Q13829 316 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 CERS5Q8N5B7 392 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 FRAT1Q92837 279 aaPredicted RBP13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
NPIPB3-202ENST00000448012 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 UBE2Q2LH0YL09 131 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 PRAMEF18Q5VWM3 479 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 MIER1Q8N108 512 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 LPIN2Q92539 896 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 GNL3LQ9NVN8 582 aaKnown RBP13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 TMOD2Q9NZR1 351 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
NPIPB3-202ENST00000448012 MAST3O60307 1309 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 TNNI2P48788 182 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 PRKG1Q13976 671 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 SIL1Q9H173 461 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 SERPINA10Q9UK55 444 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 PSME4Q14997 1843 aa13.64□□□□□ -0.23
NPIPB3-202ENST00000448012 FAM155AB1AL88 458 aaPredicted RBP13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 CIAO1O76071 339 aa13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 RASAL3Q86YV0 1011 aa13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 TEKT1Q969V4 418 aa13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 ZBED3Q96IU2 234 aaPredicted RBP13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 ANGEL1Q9UNK9 670 aaKnown RBP13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 THSD7BQ9C0I4 1608 aa13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 PAPPA2Q9BXP8 1791 aa13.63□□□□□ -0.23
NPIPB3-202ENST00000448012 BCAMP50895 628 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 ATF7IPQ6VMQ6 1270 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 MOB2Q70IA6 237 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 SLC10A4Q96EP9 437 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 SUGT1Q9Y2Z0 365 aa13.62□□□□□ -0.23
NPIPB3-202ENST00000448012 TRPA1O75762 1119 aa13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 CRKP46108 304 aa13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 IREB2P48200 963 aaKnown RBP13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 HDLBPQ00341 1268 aaKnown RBP13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 SREBF2Q12772 1141 aa13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 RASA3Q14644 834 aa13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
NPIPB3-202ENST00000448012 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms