RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MED23Q9ULK4 1368 aa29.99■■■□□ 2.39
RFFL-206ENST00000447669 DUOX1Q9NRD9 1551 aa29.99■■■□□ 2.39
RFFL-206ENST00000447669 M0R2C6 588 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 WASHC4Q2M389 1173 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 KLHL34Q8N239 644 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 CNKSR1Q969H4 720 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 PALD1Q9ULE6 856 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 MCMDC2Q4G0Z9 681 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 DPP8Q6V1X1 898 aaPredicted RBP29.98■■■□□ 2.39
RFFL-206ENST00000447669 KIAA1211Q6ZU35 1233 aa29.98■■■□□ 2.39
RFFL-206ENST00000447669 SGIP1Q9BQI5 828 aa29.97■■■□□ 2.39
RFFL-206ENST00000447669 PUS7LQ9H0K6 701 aaKnown RBP29.97■■■□□ 2.39
RFFL-206ENST00000447669 DENND2AQ9ULE3 1009 aa29.96■■■□□ 2.39
RFFL-206ENST00000447669 MAST3O60307 1309 aa29.96■■■□□ 2.39
RFFL-206ENST00000447669 KIF13BQ9NQT8 1826 aa29.96■■■□□ 2.39
RFFL-206ENST00000447669 C21orf2O43822 256 aa29.96■■■□□ 2.39
RFFL-206ENST00000447669 UTRNP46939 3433 aa29.96■■■□□ 2.39
RFFL-206ENST00000447669 DOCK2Q92608 1830 aa29.96■■■□□ 2.39
RFFL-206ENST00000447669 ADD2P35612 726 aa29.95■■■□□ 2.39
RFFL-206ENST00000447669 VPS53Q5VIR6 699 aa29.95■■■□□ 2.39
RFFL-206ENST00000447669 C7orf43Q8WVR3 580 aa29.95■■■□□ 2.39
RFFL-206ENST00000447669 LRP2BPQ9P2M1 347 aa29.95■■■□□ 2.39
RFFL-206ENST00000447669 CCDC171Q6TFL3 1326 aa29.95■■■□□ 2.38
RFFL-206ENST00000447669 RAD50Q92878 1312 aa29.95■■■□□ 2.38
RFFL-206ENST00000447669 ZNF532Q9HCE3 1301 aa29.95■■■□□ 2.38
RFFL-206ENST00000447669 PDE6AP16499 860 aa29.95■■■□□ 2.38
RFFL-206ENST00000447669 PTGER2P43116 358 aa29.95■■■□□ 2.38
RFFL-206ENST00000447669 MAGEB6Q8N7X4 407 aa29.95■■■□□ 2.38
RFFL-206ENST00000447669 DLEC1Q9Y238 1755 aa29.94■■■□□ 2.38
RFFL-206ENST00000447669 C15orf52Q6ZUT6 534 aaKnown RBP29.94■■■□□ 2.38
RFFL-206ENST00000447669 ZNF804AQ7Z570 1209 aa29.94■■■□□ 2.38
RFFL-206ENST00000447669 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.94■■■□□ 2.38
RFFL-206ENST00000447669 CD209Q9NNX6 404 aa29.94■■■□□ 2.38
RFFL-206ENST00000447669 EIF5BO60841 1220 aaKnown RBP29.93■■■□□ 2.38
RFFL-206ENST00000447669 SLC4A3P48751 1232 aa29.93■■■□□ 2.38
RFFL-206ENST00000447669 TDRD7Q8NHU6 1098 aaKnown RBP29.93■■■□□ 2.38
RFFL-206ENST00000447669 TMX4Q9H1E5 349 aaPredicted RBP29.93■■■□□ 2.38
RFFL-206ENST00000447669 HELLSQ9NRZ9 838 aa29.93■■■□□ 2.38
RFFL-206ENST00000447669 CHD4Q14839 1912 aa29.93■■■□□ 2.38
RFFL-206ENST00000447669 TCRBV5S4A2TA0A5A2 114 aa29.92■■■□□ 2.38
RFFL-206ENST00000447669 TTLL6Q8N841 843 aa29.92■■■□□ 2.38
RFFL-206ENST00000447669 APPBP2Q92624 585 aa29.91■■■□□ 2.38
RFFL-206ENST00000447669 ZFYP08048 801 aaPredicted RBP29.91■■■□□ 2.38
RFFL-206ENST00000447669 MAP3K12Q12852 859 aa29.91■■■□□ 2.38
RFFL-206ENST00000447669 DOK7Q18PE1 504 aa29.91■■■□□ 2.38
RFFL-206ENST00000447669 RAI14Q9P0K7 980 aa29.91■■■□□ 2.38
RFFL-206ENST00000447669 KIAA1551Q9HCM1 1747 aa29.9■■■□□ 2.38
RFFL-206ENST00000447669 SEMA3EO15041 775 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 PRDX5P30044 214 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 HSPA4P34932 840 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 RASEFQ8IZ41 740 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 ZNF384Q8TF68 577 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 MAP4K1Q92918 833 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 IPO9Q96P70 1041 aaKnown RBP29.89■■■□□ 2.38
RFFL-206ENST00000447669 RBM8AQ9Y5S9 174 aaKnown RBP29.89■■■□□ 2.38
RFFL-206ENST00000447669 GRIK5Q16478 980 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 LRRFIP1Q32MZ4 808 aaKnown RBP29.89■■■□□ 2.38
RFFL-206ENST00000447669 ADGRA1Q86SQ6 560 aa29.89■■■□□ 2.38
RFFL-206ENST00000447669 ZC3H12CQ9C0D7 883 aaKnown RBP29.89■■■□□ 2.38
RFFL-206ENST00000447669 ZSCAN25Q6NSZ9 544 aa29.88■■■□□ 2.37
RFFL-206ENST00000447669 UBE3CQ15386 1083 aa29.88■■■□□ 2.37
RFFL-206ENST00000447669 IL1R1P14778 569 aa29.87■■■□□ 2.37
RFFL-206ENST00000447669 TAF6LQ9Y6J9 622 aa29.87■■■□□ 2.37
RFFL-206ENST00000447669 GPAA1O43292 621 aa29.86■■■□□ 2.37
RFFL-206ENST00000447669 NECTIN1Q15223 517 aa29.86■■■□□ 2.37
RFFL-206ENST00000447669 MIGA1Q8NAN2 632 aa29.86■■■□□ 2.37
RFFL-206ENST00000447669 FOXP2O15409 715 aa29.85■■■□□ 2.37
RFFL-206ENST00000447669 HSPD1P10809 573 aaKnown RBP29.85■■■□□ 2.37
RFFL-206ENST00000447669 MCCP23508 829 aa29.85■■■□□ 2.37
RFFL-206ENST00000447669 TGFB2P61812 414 aa29.85■■■□□ 2.37
RFFL-206ENST00000447669 TICAM2Q86XR7 235 aa29.85■■■□□ 2.37
RFFL-206ENST00000447669 SNED1Q8TER0 1413 aa29.85■■■□□ 2.37
RFFL-206ENST00000447669 CD2BP2O95400 341 aaKnown RBP29.84■■■□□ 2.37
RFFL-206ENST00000447669 DBNDD1Q9H9R9 158 aa29.84■■■□□ 2.37
RFFL-206ENST00000447669 KCNQ5Q9NR82 932 aa29.84■■■□□ 2.37
RFFL-206ENST00000447669 SNX14Q9Y5W7 946 aa29.84■■■□□ 2.37
RFFL-206ENST00000447669 CYP7A1P22680 504 aa29.84■■■□□ 2.37
RFFL-206ENST00000447669 MECOMQ03112 1051 aa29.83■■■□□ 2.37
RFFL-206ENST00000447669 ERICH6Q7L0X2 663 aa29.83■■■□□ 2.37
RFFL-206ENST00000447669 PIM2Q9P1W9 311 aa29.83■■■□□ 2.37
RFFL-206ENST00000447669 PDS5AQ29RF7 1337 aaKnown RBP29.83■■■□□ 2.37
RFFL-206ENST00000447669 CREB3L3Q68CJ9 461 aa29.83■■■□□ 2.37
RFFL-206ENST00000447669 GTF2IP78347 998 aa29.82■■■□□ 2.36
RFFL-206ENST00000447669 AOC3Q16853 763 aa29.82■■■□□ 2.36
RFFL-206ENST00000447669 FBXW7Q969H0 707 aa29.82■■■□□ 2.36
RFFL-206ENST00000447669 NSUN4Q96CB9 384 aaKnown RBP29.82■■■□□ 2.36
RFFL-206ENST00000447669 ARMT1Q9H993 441 aa29.82■■■□□ 2.36
RFFL-206ENST00000447669 NLGN2Q8NFZ4 835 aa29.81■■■□□ 2.36
RFFL-206ENST00000447669 MXD3Q9BW11 206 aa29.81■■■□□ 2.36
RFFL-206ENST00000447669 COA1Q9GZY4 146 aa29.81■■■□□ 2.36
RFFL-206ENST00000447669 SLC27A2O14975 620 aa29.81■■■□□ 2.36
RFFL-206ENST00000447669 EPB41L2O43491 1005 aaKnown RBP29.81■■■□□ 2.36
RFFL-206ENST00000447669 MBD4O95243 580 aa29.81■■■□□ 2.36
RFFL-206ENST00000447669 COL9A3Q14050 684 aaPredicted RBP29.81■■■□□ 2.36
RFFL-206ENST00000447669 TTLL5Q6EMB2 1281 aa29.81■■■□□ 2.36
RFFL-206ENST00000447669 RTFDC1Q9BY42 306 aaPredicted RBP29.81■■■□□ 2.36
RFFL-206ENST00000447669 ADCK5Q3MIX3 580 aa29.8■■■□□ 2.36
RFFL-206ENST00000447669 LCORLQ8N3X6 602 aa29.8■■■□□ 2.36
RFFL-206ENST00000447669 WDR66Q8TBY9 1149 aa29.8■■■□□ 2.36
RFFL-206ENST00000447669 AIDAQ96BJ3 306 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms