RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 CDCA7LQ96GN5 454 aa22.97■■□□□ 1.27
COL9A1-205ENST00000447041 F8W031 263 aaPredicted RBP22.96■■□□□ 1.27
COL9A1-205ENST00000447041 PCDHAC2Q9Y5I4 1007 aa22.96■■□□□ 1.27
COL9A1-205ENST00000447041 ARAP2Q8WZ64 1704 aa22.96■■□□□ 1.27
COL9A1-205ENST00000447041 UBE2Q2LH0YL09 131 aa22.95■■□□□ 1.26
COL9A1-205ENST00000447041 RABL6Q3YEC7 729 aaPredicted RBP22.95■■□□□ 1.26
COL9A1-205ENST00000447041 APOBEC3FQ8IUX4 373 aaKnown RBP22.95■■□□□ 1.26
COL9A1-205ENST00000447041 ANKRD44Q8N8A2 993 aa22.95■■□□□ 1.26
COL9A1-205ENST00000447041 AKAP11Q9UKA4 1901 aa22.95■■□□□ 1.26
COL9A1-205ENST00000447041 CSRNP1Q96S65 589 aa22.94■■□□□ 1.26
COL9A1-205ENST00000447041 GYG1P46976 350 aa22.93■■□□□ 1.26
COL9A1-205ENST00000447041 UBE4AQ14139 1066 aa22.93■■□□□ 1.26
COL9A1-205ENST00000447041 TTLL12Q14166 644 aaPredicted RBP22.93■■□□□ 1.26
COL9A1-205ENST00000447041 DLGAP5Q15398 846 aa22.93■■□□□ 1.26
COL9A1-205ENST00000447041 SAGE1Q9NXZ1 904 aa22.93■■□□□ 1.26
COL9A1-205ENST00000447041 RIPOR2Q9Y4F9 1068 aa22.93■■□□□ 1.26
COL9A1-205ENST00000447041 COL1A1P02452 1464 aaPredicted RBP22.92■■□□□ 1.26
COL9A1-205ENST00000447041 NF2P35240 595 aa22.92■■□□□ 1.26
COL9A1-205ENST00000447041 FKBP1AP62942 108 aaKnown RBP22.92■■□□□ 1.26
COL9A1-205ENST00000447041 RNF186Q9NXI6 227 aa22.92■■□□□ 1.26
COL9A1-205ENST00000447041 AOX1Q06278 1338 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 MROH5Q6ZUA9 1318 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 TRPA1O75762 1119 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 PRKG1Q13976 671 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 CFAP100Q494V2 611 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 LRRC24Q50LG9 513 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 MTMR14Q8NCE2 650 aa22.91■■□□□ 1.26
COL9A1-205ENST00000447041 FAM205AQ6ZU69 1335 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 SSC5DA1L4H1 1573 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 ALDH1L2Q3SY69 923 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 TDRD7Q8NHU6 1098 aaKnown RBP22.9■■□□□ 1.26
COL9A1-205ENST00000447041 KLHDC4Q8TBB5 520 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 FAM84BQ96KN1 310 aaPredicted RBP22.9■■□□□ 1.26
COL9A1-205ENST00000447041 MCOLN1Q9GZU1 580 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 USP44Q9H0E7 712 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 SMC4Q9NTJ3 1288 aa22.9■■□□□ 1.26
COL9A1-205ENST00000447041 CLRN2A0PK11 232 aa22.89■■□□□ 1.25
COL9A1-205ENST00000447041 SPDYE2BA6NHP3 402 aa22.89■■□□□ 1.25
COL9A1-205ENST00000447041 SPDYE6P0CI01 402 aa22.89■■□□□ 1.25
COL9A1-205ENST00000447041 HIBADHP31937 336 aaKnown RBP22.89■■□□□ 1.25
COL9A1-205ENST00000447041 TRMT2AQ8IZ69 625 aaKnown RBP22.89■■□□□ 1.25
COL9A1-205ENST00000447041 DEFB129Q9H1M3 183 aa22.89■■□□□ 1.25
COL9A1-205ENST00000447041 FZD1Q9UP38 647 aa22.89■■□□□ 1.25
COL9A1-205ENST00000447041 METTL24Q5JXM2 366 aa22.88■■□□□ 1.25
COL9A1-205ENST00000447041 MFSD14BQ5SR56 506 aa22.88■■□□□ 1.25
COL9A1-205ENST00000447041 PRMT6Q96LA8 375 aaPredicted RBP22.88■■□□□ 1.25
COL9A1-205ENST00000447041 PTPN12Q05209 780 aaKnown RBP22.87■■□□□ 1.25
COL9A1-205ENST00000447041 MKRN3Q13064 507 aaKnown RBP22.87■■□□□ 1.25
COL9A1-205ENST00000447041 DGKZQ13574 1117 aa22.87■■□□□ 1.25
COL9A1-205ENST00000447041 VGLL2Q8N8G2 317 aa22.87■■□□□ 1.25
COL9A1-205ENST00000447041 CCDC85CA6NKD9 419 aa22.86■■□□□ 1.25
COL9A1-205ENST00000447041 MYO1BO43795 1136 aa22.86■■□□□ 1.25
COL9A1-205ENST00000447041 RBM5P52756 815 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL9A1-205ENST00000447041 ARMC9Q7Z3E5 817 aa22.86■■□□□ 1.25
COL9A1-205ENST00000447041 REM2Q8IYK8 340 aaPredicted RBP22.86■■□□□ 1.25
COL9A1-205ENST00000447041 VEZTQ9HBM0 779 aa22.86■■□□□ 1.25
COL9A1-205ENST00000447041 ANGEL1Q9UNK9 670 aaKnown RBP22.86■■□□□ 1.25
COL9A1-205ENST00000447041 IQSEC3Q9UPP2 1182 aaPredicted RBP22.86■■□□□ 1.25
COL9A1-205ENST00000447041 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
COL9A1-205ENST00000447041 TTF2Q9UNY4 1162 aaKnown RBP22.85■■□□□ 1.25
COL9A1-205ENST00000447041 PDE8BO95263 885 aa22.84■■□□□ 1.25
COL9A1-205ENST00000447041 FBXO33Q7Z6M2 555 aa22.84■■□□□ 1.25
COL9A1-205ENST00000447041 PPP2R3BQ9Y5P8 575 aa22.84■■□□□ 1.25
COL9A1-205ENST00000447041 RFX5P48382 616 aaPredicted RBP22.83■■□□□ 1.25
COL9A1-205ENST00000447041 GRIK5Q16478 980 aa22.83■■□□□ 1.25
COL9A1-205ENST00000447041 LDLRAD1Q5T700 205 aa22.83■■□□□ 1.25
COL9A1-205ENST00000447041 VPS37DQ86XT2 251 aa22.83■■□□□ 1.25
COL9A1-205ENST00000447041 CHAF1AQ13111 956 aaPredicted RBP22.82■■□□□ 1.24
COL9A1-205ENST00000447041 NOB1Q9ULX3 412 aaKnown RBP22.82■■□□□ 1.24
COL9A1-205ENST00000447041 CT47B1P0C2W7 299 aaPredicted RBP22.81■■□□□ 1.24
COL9A1-205ENST00000447041 CAVIN4Q5BKX8 364 aa22.81■■□□□ 1.24
COL9A1-205ENST00000447041 NBPF12Q5TAG4 269 aaPredicted RBP22.81■■□□□ 1.24
COL9A1-205ENST00000447041 SERPINA10Q9UK55 444 aa22.81■■□□□ 1.24
COL9A1-205ENST00000447041 OTOFQ9HC10 1997 aa22.81■■□□□ 1.24
COL9A1-205ENST00000447041 BCAMP50895 628 aa22.8■■□□□ 1.24
COL9A1-205ENST00000447041 RASA3Q14644 834 aa22.8■■□□□ 1.24
COL9A1-205ENST00000447041 MAP3K11Q16584 847 aa22.8■■□□□ 1.24
COL9A1-205ENST00000447041 SPDYE2Q495Y8 402 aa22.8■■□□□ 1.24
COL9A1-205ENST00000447041 TDRD3Q9H7E2 651 aaKnown RBP22.8■■□□□ 1.24
COL9A1-205ENST00000447041 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.8■■□□□ 1.24
COL9A1-205ENST00000447041 ZNF70Q9UC06 446 aaPredicted RBP22.8■■□□□ 1.24
COL9A1-205ENST00000447041 LAMB1P07942 1786 aa22.8■■□□□ 1.24
COL9A1-205ENST00000447041 MYH13Q9UKX3 1938 aa22.8■■□□□ 1.24
COL9A1-205ENST00000447041 EYA2O00167 538 aa22.79■■□□□ 1.24
COL9A1-205ENST00000447041 FRAT2O75474 233 aaPredicted RBP22.79■■□□□ 1.24
COL9A1-205ENST00000447041 TBC1D8O95759 1140 aa22.79■■□□□ 1.24
COL9A1-205ENST00000447041 UBTFL1P0CB47 393 aaPredicted RBP22.79■■□□□ 1.24
COL9A1-205ENST00000447041 FGFR2P21802 821 aa22.79■■□□□ 1.24
COL9A1-205ENST00000447041 CRKP46108 304 aa22.79■■□□□ 1.24
COL9A1-205ENST00000447041 TM4SF4P48230 202 aa22.79■■□□□ 1.24
COL9A1-205ENST00000447041 PUM3Q15397 648 aaKnown RBP22.79■■□□□ 1.24
COL9A1-205ENST00000447041 DZIP1LQ8IYY4 767 aaKnown RBP22.79■■□□□ 1.24
COL9A1-205ENST00000447041 CLMNQ96JQ2 1002 aa22.79■■□□□ 1.24
COL9A1-205ENST00000447041 PPP1R12BO60237 982 aaPredicted RBP22.78■■□□□ 1.24
COL9A1-205ENST00000447041 SPRYD7Q5W111 196 aa22.78■■□□□ 1.24
COL9A1-205ENST00000447041 SREBF2Q12772 1141 aa22.77■■□□□ 1.24
COL9A1-205ENST00000447041 SUPT20HL1Q3ZLR7 823 aa22.77■■□□□ 1.24
COL9A1-205ENST00000447041 ATG9AQ7Z3C6 839 aa22.77■■□□□ 1.24
COL9A1-205ENST00000447041 CDAN1Q8IWY9 1227 aa22.77■■□□□ 1.24
COL9A1-205ENST00000447041 API5Q9BZZ5 524 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms