RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PPEF1O14829 653 aaPredicted RBP15.51■□□□□ 0.07
DDX56-206ENST00000446987 GRIN3BO60391 1043 aa15.51■□□□□ 0.07
DDX56-206ENST00000446987 CAPN2P17655 700 aa15.51■□□□□ 0.07
DDX56-206ENST00000446987 CTR9Q6PD62 1173 aa15.51■□□□□ 0.07
DDX56-206ENST00000446987 SECISBP2LQ93073 1101 aaKnown RBP15.51■□□□□ 0.07
DDX56-206ENST00000446987 NCBP1Q09161 790 aaKnown RBP15.5■□□□□ 0.07
DDX56-206ENST00000446987 RABL6Q3YEC7 729 aaPredicted RBP15.5■□□□□ 0.07
DDX56-206ENST00000446987 CCDC152Q4G0S7 254 aa15.5■□□□□ 0.07
DDX56-206ENST00000446987 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
DDX56-206ENST00000446987 DDX46Q7L014 1031 aaKnown RBP15.5■□□□□ 0.07
DDX56-206ENST00000446987 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
DDX56-206ENST00000446987 RBM27Q9P2N5 1060 aaKnown RBP15.5■□□□□ 0.07
DDX56-206ENST00000446987 HSP90B1P14625 803 aaKnown RBP15.49■□□□□ 0.07
DDX56-206ENST00000446987 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
DDX56-206ENST00000446987 ATP6V0A2Q9Y487 856 aa15.49■□□□□ 0.07
DDX56-206ENST00000446987 LTBP3Q9NS15 1303 aa15.49■□□□□ 0.07
DDX56-206ENST00000446987 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 CLGNO14967 610 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
DDX56-206ENST00000446987 USP25Q9UHP3 1055 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 ITGA6P23229 1130 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 ARHGAP27Q6ZUM4 889 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
DDX56-206ENST00000446987 IGSF3O75054 1194 aa15.47■□□□□ 0.07
DDX56-206ENST00000446987 BBOX1O75936 387 aa15.47■□□□□ 0.07
DDX56-206ENST00000446987 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
DDX56-206ENST00000446987 RAD50Q92878 1312 aa15.47■□□□□ 0.07
DDX56-206ENST00000446987 RPS8P62241 208 aaKnown RBP15.46■□□□□ 0.07
DDX56-206ENST00000446987 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
DDX56-206ENST00000446987 GOLGA6L6A8MZA4 724 aa15.46■□□□□ 0.06
DDX56-206ENST00000446987 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.06
DDX56-206ENST00000446987 SLFNL1Q499Z3 407 aa15.46■□□□□ 0.06
DDX56-206ENST00000446987 SP8Q8IXZ3 490 aa15.46■□□□□ 0.06
DDX56-206ENST00000446987 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.06
DDX56-206ENST00000446987 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 TRIM6-TRIM34B2RNG4 842 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 SOGA3Q5TF21 947 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 TBC1D9Q6ZT07 1266 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 TRIM34Q9BYJ4 488 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 ZDHHC9Q9Y397 364 aa15.45■□□□□ 0.06
DDX56-206ENST00000446987 ZBTB7BO15156 539 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 CDC45O75419 566 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.06
DDX56-206ENST00000446987 RNF214Q8ND24 703 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 PSMD1Q99460 953 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 TAOK3Q9H2K8 898 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 REC8O95072 547 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 ADCY5O95622 1261 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 CYP2C19P33261 490 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 CC2D2BQ6DHV5 1058 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 TMC4Q7Z404 712 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 ANKRD18AQ8IVF6 992 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 ITPRIPQ8IWB1 547 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 ZNF397Q8NF99 534 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 ZNF594Q96JF6 807 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 CDC5LQ99459 802 aaKnown RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 RTFDC1Q9BY42 306 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 TTC12Q9H892 705 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
DDX56-206ENST00000446987 ZNF646O15015 1829 aaPredicted RBP15.44■□□□□ 0.06
DDX56-206ENST00000446987 GPSM2P81274 684 aa15.43■□□□□ 0.06
DDX56-206ENST00000446987 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
DDX56-206ENST00000446987 BSDC1Q9NW68 430 aaPredicted RBP15.43■□□□□ 0.06
DDX56-206ENST00000446987 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDX56-206ENST00000446987 WTIPA6NIX2 430 aaPredicted RBP15.42■□□□□ 0.06
DDX56-206ENST00000446987 ST18O60284 1047 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 GNAI3P08754 354 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 MUM1L1Q5H9M0 696 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 C9orf131Q5VYM1 1079 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 ZNF277Q9NRM2 450 aaPredicted RBP15.42■□□□□ 0.06
DDX56-206ENST00000446987 CHMP3Q9Y3E7 222 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 ANKRD18BA2A2Z9 1011 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 KDM4AO75164 1064 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 IFIT5Q13325 482 aaKnown RBP15.42■□□□□ 0.06
DDX56-206ENST00000446987 MTX1Q13505 466 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 KLHDC4Q8TBB5 520 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 MINPP1Q9UNW1 487 aa15.42■□□□□ 0.06
DDX56-206ENST00000446987 LMNB1P20700 586 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 PSEN1P49768 467 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 PUS3Q9BZE2 481 aaKnown RBP15.41■□□□□ 0.06
DDX56-206ENST00000446987 C1orf115Q9H7X2 142 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 RNF181Q9P0P0 153 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 POLLQ9UGP5 575 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 SCN9AQ15858 1988 aa15.41■□□□□ 0.06
DDX56-206ENST00000446987 KIF1BPQ96EK5 621 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 GPR101Q96P66 508 aaPredicted RBP15.4■□□□□ 0.06
DDX56-206ENST00000446987 BRMS1Q9HCU9 246 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 PSME4Q14997 1843 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 BRD1O95696 1058 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
DDX56-206ENST00000446987 CCDC57Q2TAC2 916 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 MPNDQ8N594 471 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 TMEM87AQ8NBN3 555 aa15.4■□□□□ 0.06
DDX56-206ENST00000446987 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms