RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 F8W031 263 aaPredicted RBP31.04■■■□□ 2.56
PMS1-214ENST00000446877 C15orf52Q6ZUT6 534 aaKnown RBP31.04■■■□□ 2.56
PMS1-214ENST00000446877 ZNF804AQ7Z570 1209 aa31.04■■■□□ 2.56
PMS1-214ENST00000446877 CERS5Q8N5B7 392 aa31.04■■■□□ 2.56
PMS1-214ENST00000446877 CHMP3Q9Y3E7 222 aa31.04■■■□□ 2.56
PMS1-214ENST00000446877 MYH3P11055 1940 aa31.03■■■□□ 2.56
PMS1-214ENST00000446877 SNAP23O00161 211 aa31.03■■■□□ 2.56
PMS1-214ENST00000446877 ZBTB48P10074 688 aaPredicted RBP31.02■■■□□ 2.56
PMS1-214ENST00000446877 MAP3K11Q16584 847 aa31.02■■■□□ 2.56
PMS1-214ENST00000446877 IFNL1Q8IU54 200 aa31.02■■■□□ 2.56
PMS1-214ENST00000446877 SPEF2Q9C093 1822 aa31.02■■■□□ 2.56
PMS1-214ENST00000446877 UNCXA6NJT0 531 aa31.01■■■□□ 2.55
PMS1-214ENST00000446877 CFAP100Q494V2 611 aa31.01■■■□□ 2.55
PMS1-214ENST00000446877 CLRN2A0PK11 232 aa31■■■□□ 2.55
PMS1-214ENST00000446877 IL1R1P14778 569 aa31■■■□□ 2.55
PMS1-214ENST00000446877 VEZTQ9HBM0 779 aa31■■■□□ 2.55
PMS1-214ENST00000446877 SPDYE2BA6NHP3 402 aa30.99■■■□□ 2.55
PMS1-214ENST00000446877 SPDYE6P0CI01 402 aa30.99■■■□□ 2.55
PMS1-214ENST00000446877 RBM5P52756 815 aaKnown RBP eCLIP30.99■■■□□ 2.55
PMS1-214ENST00000446877 FKBP1AP62942 108 aaKnown RBP30.99■■■□□ 2.55
PMS1-214ENST00000446877 WNK4Q96J92 1243 aa30.99■■■□□ 2.55
PMS1-214ENST00000446877 CLMNQ96JQ2 1002 aa30.99■■■□□ 2.55
PMS1-214ENST00000446877 TRIM17Q9Y577 477 aa30.99■■■□□ 2.55
PMS1-214ENST00000446877 IRS2Q9Y4H2 1338 aa30.98■■■□□ 2.55
PMS1-214ENST00000446877 FOXO4P98177 505 aa30.98■■■□□ 2.55
PMS1-214ENST00000446877 TAF7LQ5H9L4 462 aa30.98■■■□□ 2.55
PMS1-214ENST00000446877 OTUD7BQ6GQQ9 843 aa30.98■■■□□ 2.55
PMS1-214ENST00000446877 PRMT6Q96LA8 375 aaPredicted RBP30.98■■■□□ 2.55
PMS1-214ENST00000446877 PCDHAC2Q9Y5I4 1007 aa30.98■■■□□ 2.55
PMS1-214ENST00000446877 IREB2P48200 963 aaKnown RBP30.97■■■□□ 2.55
PMS1-214ENST00000446877 CCDC57Q2TAC2 916 aa30.97■■■□□ 2.55
PMS1-214ENST00000446877 PLIN1O60240 522 aa30.96■■■□□ 2.55
PMS1-214ENST00000446877 NCBP3Q53F19 620 aaKnown RBP30.96■■■□□ 2.55
PMS1-214ENST00000446877 JAG2Q9Y219 1238 aa30.96■■■□□ 2.55
PMS1-214ENST00000446877 FANCIQ9NVI1 1328 aa30.96■■■□□ 2.55
PMS1-214ENST00000446877 VAMP4O75379 141 aa30.95■■■□□ 2.55
PMS1-214ENST00000446877 CCDC184Q52MB2 194 aa30.95■■■□□ 2.55
PMS1-214ENST00000446877 NBPF12Q5TAG4 269 aaPredicted RBP30.95■■■□□ 2.55
PMS1-214ENST00000446877 LMBR1LQ6UX01 489 aa30.95■■■□□ 2.55
PMS1-214ENST00000446877 LDHAL6AQ6ZMR3 332 aa30.95■■■□□ 2.55
PMS1-214ENST00000446877 CNNM1Q9NRU3 951 aa30.95■■■□□ 2.55
PMS1-214ENST00000446877 ZNF646O15015 1829 aaPredicted RBP30.95■■■□□ 2.55
PMS1-214ENST00000446877 IGF2BP3O00425 579 aaKnown RBP eCLIP30.94■■■□□ 2.54
PMS1-214ENST00000446877 RASA3Q14644 834 aa30.94■■■□□ 2.54
PMS1-214ENST00000446877 BEND3Q5T5X7 828 aa30.93■■■□□ 2.54
PMS1-214ENST00000446877 INTS3Q68E01 1043 aaKnown RBP30.93■■■□□ 2.54
PMS1-214ENST00000446877 OTOP1Q7RTM1 612 aa30.93■■■□□ 2.54
PMS1-214ENST00000446877 ERO1AQ96HE7 468 aa30.93■■■□□ 2.54
PMS1-214ENST00000446877 F6X3S4 739 aa30.92■■■□□ 2.54
PMS1-214ENST00000446877 USP2O75604 605 aaPredicted RBP30.92■■■□□ 2.54
PMS1-214ENST00000446877 ANKRD13AQ8IZ07 590 aa30.92■■■□□ 2.54
PMS1-214ENST00000446877 TNFAIP1Q13829 316 aa30.91■■■□□ 2.54
PMS1-214ENST00000446877 WDR63Q8IWG1 891 aa30.91■■■□□ 2.54
PMS1-214ENST00000446877 ZNF594Q96JF6 807 aaPredicted RBP30.91■■■□□ 2.54
PMS1-214ENST00000446877 SSC5DA1L4H1 1573 aa30.91■■■□□ 2.54
PMS1-214ENST00000446877 EXOSC9Q06265 439 aaKnown RBP30.9■■■□□ 2.54
PMS1-214ENST00000446877 SALL2Q9Y467 1007 aaPredicted RBP30.9■■■□□ 2.54
PMS1-214ENST00000446877 GRM8O00222 908 aa30.89■■■□□ 2.54
PMS1-214ENST00000446877 C9orf78Q9NZ63 289 aaPredicted RBP30.89■■■□□ 2.54
PMS1-214ENST00000446877 CRHR2Q13324 411 aa30.88■■■□□ 2.53
PMS1-214ENST00000446877 EPHA10Q5JZY3 1008 aa30.88■■■□□ 2.53
PMS1-214ENST00000446877 GCC1Q96CN9 775 aa30.88■■■□□ 2.53
PMS1-214ENST00000446877 FAM205AQ6ZU69 1335 aa30.88■■■□□ 2.53
PMS1-214ENST00000446877 MFSD14BQ5SR56 506 aa30.87■■■□□ 2.53
PMS1-214ENST00000446877 SERPINA10Q9UK55 444 aa30.87■■■□□ 2.53
PMS1-214ENST00000446877 TTF2Q9UNY4 1162 aaKnown RBP30.87■■■□□ 2.53
PMS1-214ENST00000446877 PTPN22Q9Y2R2 807 aa30.87■■■□□ 2.53
PMS1-214ENST00000446877 AOX1Q06278 1338 aa30.87■■■□□ 2.53
PMS1-214ENST00000446877 HIBADHP31937 336 aaKnown RBP30.86■■■□□ 2.53
PMS1-214ENST00000446877 CD99L2Q8TCZ2 262 aa30.86■■■□□ 2.53
PMS1-214ENST00000446877 EFCC1Q9HA90 598 aa30.86■■■□□ 2.53
PMS1-214ENST00000446877 ZNF70Q9UC06 446 aaPredicted RBP30.86■■■□□ 2.53
PMS1-214ENST00000446877 GJA5P36382 358 aa30.85■■■□□ 2.53
PMS1-214ENST00000446877 SP3Q02447 781 aa30.85■■■□□ 2.53
PMS1-214ENST00000446877 UBE4AQ14139 1066 aa30.85■■■□□ 2.53
PMS1-214ENST00000446877 SPDYE2Q495Y8 402 aa30.85■■■□□ 2.53
PMS1-214ENST00000446877 TDRD7Q8NHU6 1098 aaKnown RBP30.85■■■□□ 2.53
PMS1-214ENST00000446877 ELP3Q9H9T3 547 aa30.85■■■□□ 2.53
PMS1-214ENST00000446877 TESPA1A2RU30 521 aaPredicted RBP30.84■■■□□ 2.53
PMS1-214ENST00000446877 OPTNQ96CV9 577 aa30.84■■■□□ 2.53
PMS1-214ENST00000446877 TDRD3Q9H7E2 651 aaKnown RBP30.84■■■□□ 2.53
PMS1-214ENST00000446877 GYG1P46976 350 aa30.83■■■□□ 2.53
PMS1-214ENST00000446877 PTPN18Q99952 460 aa30.83■■■□□ 2.53
PMS1-214ENST00000446877 MRS2Q9HD23 443 aa30.83■■■□□ 2.53
PMS1-214ENST00000446877 HTTP42858 3142 aa30.83■■■□□ 2.53
PMS1-214ENST00000446877 POTEFA5A3E0 1075 aa30.82■■■□□ 2.52
PMS1-214ENST00000446877 TNNI2P48788 182 aa30.82■■■□□ 2.52
PMS1-214ENST00000446877 DZIP1LQ8IYY4 767 aaKnown RBP30.82■■■□□ 2.52
PMS1-214ENST00000446877 ALDH1L1O75891 902 aa30.81■■■□□ 2.52
PMS1-214ENST00000446877 ARHGEF6Q15052 776 aa30.81■■■□□ 2.52
PMS1-214ENST00000446877 SLC4A10Q6U841 1118 aa30.81■■■□□ 2.52
PMS1-214ENST00000446877 FAM84BQ96KN1 310 aaPredicted RBP30.81■■■□□ 2.52
PMS1-214ENST00000446877 VPS37DQ86XT2 251 aa30.8■■■□□ 2.52
PMS1-214ENST00000446877 TCP10L2B9ZVM9 353 aa30.79■■■□□ 2.52
PMS1-214ENST00000446877 ARMC5Q96C12 935 aa30.79■■■□□ 2.52
PMS1-214ENST00000446877 SRCIN1Q9C0H9 1055 aa30.79■■■□□ 2.52
PMS1-214ENST00000446877 CRKP46108 304 aa30.78■■■□□ 2.52
PMS1-214ENST00000446877 MAP3K9P80192 1104 aa30.78■■■□□ 2.52
PMS1-214ENST00000446877 CSADQ9Y600 493 aa30.78■■■□□ 2.52
PMS1-214ENST00000446877 GTF2A2P52657 109 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms