RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 RNF181Q9P0P0 153 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 HMG20BQ9P0W2 317 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 GJA3Q9Y6H8 435 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 UTRNP46939 3433 aa9.23□□□□□ -0.93
SF3A3P1-201ENST00000446317 YDJCA8MPS7 323 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 FBXO33Q7Z6M2 555 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 GPATCH3Q96I76 525 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 EYA3Q99504 573 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 CD209Q9NNX6 404 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 GPR108Q9NPR9 543 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 ABCF2Q9UG63 623 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 ZBTB12Q9Y330 459 aaPredicted RBP9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 MED23Q9ULK4 1368 aa9.22□□□□□ -0.93
SF3A3P1-201ENST00000446317 SHTN1A0MZ66 631 aa9.21□□□□□ -0.93
SF3A3P1-201ENST00000446317 PLCB2Q00722 1185 aa9.21□□□□□ -0.93
SF3A3P1-201ENST00000446317 TTC22Q5TAA0 569 aa9.21□□□□□ -0.93
SF3A3P1-201ENST00000446317 C9orf131Q5VYM1 1079 aa9.21□□□□□ -0.93
SF3A3P1-201ENST00000446317 NIM1KQ8IY84 436 aa9.21□□□□□ -0.93
SF3A3P1-201ENST00000446317 SPATA5Q8NB90 893 aa9.21□□□□□ -0.93
SF3A3P1-201ENST00000446317 ZNF541Q9H0D2 1346 aa9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 ARAP2Q8WZ64 1704 aa9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 IDH1O75874 414 aaKnown RBP9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 SDSP20132 328 aa9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 SUPT20HQ8NEM7 779 aa9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 ZNF526Q8TF50 670 aaPredicted RBP9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 RTFDC1Q9BY42 306 aaPredicted RBP9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 PCDHAC2Q9Y5I4 1007 aa9.21□□□□□ -0.94
SF3A3P1-201ENST00000446317 PSMD14O00487 310 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 ATP5JP18859 108 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 ARID4AP29374 1257 aaPredicted RBP9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 SCNN1DP51172 638 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 CERS5Q8N5B7 392 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 PSMD1Q99460 953 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 FSD1Q9BTV5 496 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 GNL3LQ9NVN8 582 aaKnown RBP9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 PAG1Q9NWQ8 432 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 RAI14Q9P0K7 980 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 STAP2Q9UGK3 403 aa9.2□□□□□ -0.94
SF3A3P1-201ENST00000446317 ERC2O15083 957 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 UQCRFS1P1P0C7P4 283 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 PRDX5P30044 214 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 TTLL5Q6EMB2 1281 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 CCDC129Q6ZRS4 1044 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 KIAA0825Q8IV33 1275 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 TDRD7Q8NHU6 1098 aaKnown RBP9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 JDP2Q8WYK2 163 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 SEC62Q99442 399 aaKnown RBP9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 HAUS7Q99871 368 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 COA1Q9GZY4 146 aa9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 SCAF8Q9UPN6 1271 aaKnown RBP9.19□□□□□ -0.94
SF3A3P1-201ENST00000446317 TTC41PQ6P2S7 1318 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 LMNB1P20700 586 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 CXCL9Q07325 125 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 MAGEB6Q8N7X4 407 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 MIGA1Q8NAN2 632 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 FAM227BQ96M60 508 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 LRP2BPQ9P2M1 347 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 DENND2AQ9ULE3 1009 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 ADAMTSL1Q8N6G6 1762 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 FER1L6Q2WGJ9 1857 aa9.18□□□□□ -0.94
SF3A3P1-201ENST00000446317 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 DDNO94850 711 aaPredicted RBP9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 IL1R1P14778 569 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 SLC4A8Q2Y0W8 1093 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 AOX1Q06278 1338 aa9.17□□□□□ -0.94
SF3A3P1-201ENST00000446317 GMPSP49915 693 aaPredicted RBP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 RBM5P52756 815 aaKnown RBP eCLIP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 DYNLL1P63167 89 aaKnown RBP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 MECOMQ03112 1051 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 DACT2Q5SW24 774 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 CIAPIN1Q6FI81 312 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 CWC27Q6UX04 472 aaKnown RBP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 C15orf52Q6ZUT6 534 aaKnown RBP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 ADGRA1Q86SQ6 560 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 DZIP1Q86YF9 867 aaKnown RBP9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 CNTROBQ8N137 903 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 ZNF384Q8TF68 577 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 IL25Q9H293 177 aa9.16□□□□□ -0.94
SF3A3P1-201ENST00000446317 A0A0D9SFI3 127 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 M0R2C6 588 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 CYP7A1P22680 504 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 EIF6P56537 245 aaKnown RBP9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 SLC9C2Q5TAH2 1124 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms