RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CNTNAP5Q8WYK1 1306 aa7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 H3BRJ5 948 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 USP17L7P0C7H9 530 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 GSTT1P30711 240 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 FCGRTP55899 365 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 DMRTC2Q8IXT2 367 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 DTWD1Q8N5C7 304 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 CLEC4MQ9H2X3 399 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
HMGB1P48-201ENST00000446155 SORBS3O60504 671 aa7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 DEAF1O75398 565 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 ESRRAP11474 423 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 FAAP100Q0VG06 881 aa7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 BEND7Q8N7W2 519 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 PLVAPQ9BX97 442 aa7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 PPM1HQ9ULR3 514 aa7.42□□□□□ -1.22
HMGB1P48-201ENST00000446155 A0A0A0MRY4 1105 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 PIK3R2O00459 728 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 COL8A1P27658 744 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 PCDH1Q08174 1060 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 ZNF423Q2M1K9 1284 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 HGSNATQ68CP4 663 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 PODNQ7Z5L7 613 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 WNT8BQ93098 351 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 SCARF2Q96GP6 870 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 CRELD1Q96HD1 420 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 SRA1Q9HD15 236 aaKnown RBP7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
HMGB1P48-201ENST00000446155 LINC01387J3KSC0 135 aa7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 SOX1O00570 391 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 B3GALT4O96024 378 aa7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 DTHD1Q6ZMT9 781 aa7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 MAP4K3Q8IVH8 894 aa7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 FMR1NBQ8N0W7 255 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 GALNT11Q8NCW6 608 aa7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 SOX17Q9H6I2 414 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 ZFYVE1Q9HBF4 777 aa7.4□□□□□ -1.22
HMGB1P48-201ENST00000446155 USP31Q70CQ4 1352 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 FAM181BA6NEQ2 426 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 DLL1O00548 723 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 FSCN2O14926 492 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 RECKO95980 971 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 CABP4P57796 275 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 PIP4K2BP78356 416 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 IKBKEQ14164 716 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 TXNDC11Q6PKC3 985 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 FBXO11Q86XK2 927 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 MRRFQ96E11 262 aaKnown RBP7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 NRSN2Q9GZP1 204 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 OSGEPQ9NPF4 335 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 VTI1BQ9UEU0 232 aa7.39□□□□□ -1.23
HMGB1P48-201ENST00000446155 ITGAEP38570 1179 aa7.38□□□□□ -1.23
HMGB1P48-201ENST00000446155 MEI1Q5TIA1 1274 aa7.38□□□□□ -1.23
HMGB1P48-201ENST00000446155 MRS2Q9HD23 443 aa7.38□□□□□ -1.23
HMGB1P48-201ENST00000446155 SEC31BQ9NQW1 1179 aa7.38□□□□□ -1.23
HMGB1P48-201ENST00000446155 NOP53Q9NZM5 478 aaKnown RBP7.38□□□□□ -1.23
HMGB1P48-201ENST00000446155 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 CDC25BP30305 580 aa7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 GSK3AP49840 483 aa7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 ST13P50502 369 aaKnown RBP7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 NECAB3Q96P71 396 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 AKAP2Q9Y2D5 859 aa7.37□□□□□ -1.23
HMGB1P48-201ENST00000446155 FAM177BA6PVY3 158 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 FAM229AH3BQW9 127 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 ENC1O14682 589 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 ADAM11O75078 769 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 RAC1P63000 192 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 C19orf57Q0VDD7 668 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 FOXD4L6Q3SYB3 417 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 FAM117BQ6P1L5 589 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 FOXD4L3Q6VB84 417 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 KLHL23Q8NBE8 558 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 KLHDC7BQ96G42 594 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 CARD10Q9BWT7 1032 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 BACH2Q9BYV9 841 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 KCNK4Q9NYG8 393 aa7.36□□□□□ -1.23
HMGB1P48-201ENST00000446155 ELNP15502 786 aa7.35□□□□□ -1.23
HMGB1P48-201ENST00000446155 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
HMGB1P48-201ENST00000446155 TRIM28Q13263 835 aaKnown RBP7.35□□□□□ -1.23
HMGB1P48-201ENST00000446155 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P48-201ENST00000446155 FBXO24O75426 580 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 SPATA31C1P0DKV0 1188 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 SUZ12Q15022 739 aaKnown RBP7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 TPTE2Q6XPS3 522 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 SV2BQ7L1I2 683 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 CEP44Q9C0F1 390 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 TMEM39AQ9NV64 488 aa7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 TTF2Q9UNY4 1162 aaKnown RBP7.34□□□□□ -1.23
HMGB1P48-201ENST00000446155 CELA3AP09093 270 aa7.33□□□□□ -1.24
HMGB1P48-201ENST00000446155 SELPP16109 830 aa7.33□□□□□ -1.24
HMGB1P48-201ENST00000446155 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P48-201ENST00000446155 KCNMA1Q12791 1236 aa7.33□□□□□ -1.24
HMGB1P48-201ENST00000446155 PRRT3Q5FWE3 981 aa7.33□□□□□ -1.24
HMGB1P48-201ENST00000446155 SLC7A3Q8WY07 619 aa7.33□□□□□ -1.24
HMGB1P48-201ENST00000446155 NOC4LQ9BVI4 516 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 736.4 ms