RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 HEG1Q9ULI3 1381 aa8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 PRR23AA6NEV1 266 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 GJA5P36382 358 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 SLC10A5Q5PT55 438 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 NFATC2IPQ8NCF5 419 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 EYA1Q99502 592 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 RPAP1Q9BWH6 1393 aaPredicted RBP8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 CANXP27824 592 aaKnown RBP8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 DZIP3Q86Y13 1208 aaKnown RBP8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 ARHGAP39Q9C0H5 1083 aa8.97□□□□□ -0.97
BRAFP1-201ENST00000445336 USP17L8P0C7I0 530 aa8.96□□□□□ -0.97
BRAFP1-201ENST00000445336 NBPF9Q3BBW0 867 aa8.96□□□□□ -0.97
BRAFP1-201ENST00000445336 IRS1P35568 1242 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 TCF15Q12870 199 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 ZNF530Q6P9A1 599 aaPredicted RBP8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 UPF3BQ9BZI7 483 aaKnown RBP8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 PRKAG3Q9UGI9 489 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 CCL15-CCL14A0A0B4J2E2 113 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 HMGCRP04035 888 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 CCL15Q16663 113 aa8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 ZBED3Q96IU2 234 aaPredicted RBP8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 MYBBP1AQ9BQG0 1328 aaKnown RBP8.96□□□□□ -0.98
BRAFP1-201ENST00000445336 ABCC12Q96J65 1359 aa8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 SCN9AQ15858 1988 aa8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 MYCP01106 439 aaPredicted RBP8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 KHSRPQ92945 711 aaKnown RBP eCLIP8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 KCNH4Q9UQ05 1017 aa8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 ARAP2Q8WZ64 1704 aa8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
BRAFP1-201ENST00000445336 ASTN2O75129 1339 aaPredicted RBP8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 ERVV-1B6SEH8 477 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 LRRC26Q2I0M4 334 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 GJD3Q8N144 294 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 NUP98P52948 1817 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 RLFQ13129 1914 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 ECE2O60344 883 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 SLC45A1Q9Y2W3 748 aa8.94□□□□□ -0.98
BRAFP1-201ENST00000445336 BCRP11274 1271 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 PRKCZQ05513 592 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 FAM178BQ8IXR5 827 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 RNPC3Q96LT9 517 aaKnown RBP8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 SH2B1Q9NRF2 756 aaPredicted RBP8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 TBC1D2BQ9UPU7 963 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 KCNQ1P51787 676 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 SNX17Q15036 470 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 RASIP1Q5U651 963 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 LURAP1LQ8IV03 231 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 LMCD1Q9NZU5 365 aa8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 NIP7Q9Y221 180 aaKnown RBP eCLIP8.93□□□□□ -0.98
BRAFP1-201ENST00000445336 CTGFP29279 349 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 WASHC4Q2M389 1173 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 POTEDQ86YR6 584 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 UIMC1Q96RL1 719 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 ADGRE1Q14246 886 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 C9orf50Q5SZB4 431 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 MAP3K21Q5TCX8 1036 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 FAM43AQ8N2R8 423 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 HLA-CQ95604 372 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 SEMA4AQ9H3S1 761 aa8.92□□□□□ -0.98
BRAFP1-201ENST00000445336 LEXMQ3ZCV2 418 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 DLL3Q9NYJ7 618 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 BDP1A6H8Y1 2624 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 ABCC4O15439 1325 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 OPTNQ96CV9 577 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
BRAFP1-201ENST00000445336 SPDYE5A6NIY4 337 aa8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 SLC5A1P13866 664 aa8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 GTF2E1P29083 439 aaPredicted RBP8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 SNAPC2Q13487 334 aa8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 ZBTB38Q8NAP3 1195 aaPredicted RBP8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 PLXNA1Q9UIW2 1896 aa8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 MSRAQ9UJ68 235 aa8.9□□□□□ -0.98
BRAFP1-201ENST00000445336 GRAPQ13588 217 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 GRAPLQ8TC17 118 aaPredicted RBP8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 PARK7Q99497 189 aaKnown RBP8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 ALG13Q9NP73 1137 aaKnown RBP8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 PODXL2Q9NZ53 605 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 PPIL2Q13356 520 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 HERC4Q5GLZ8 1057 aaPredicted RBP8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 AOX1Q06278 1338 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 COL4A3Q01955 1670 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 USP2O75604 605 aaPredicted RBP8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 BORCS6Q96GS4 357 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 CLMNQ96JQ2 1002 aa8.89□□□□□ -0.99
BRAFP1-201ENST00000445336 A0A0C4DFX4 3053 aa8.88□□□□□ -0.99
BRAFP1-201ENST00000445336 PARP10Q53GL7 1025 aa8.88□□□□□ -0.99
BRAFP1-201ENST00000445336 PRDM12Q9H4Q4 367 aa8.88□□□□□ -0.99
BRAFP1-201ENST00000445336 BTBD19C9JJ37 291 aa8.88□□□□□ -0.99
BRAFP1-201ENST00000445336 GTPBP6O43824 516 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms