RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 HAND2P61296 217 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 TNIP1Q15025 636 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 ZSCAN26Q16670 478 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 LDHAL6AQ6ZMR3 332 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 ANKRD13DQ6ZTN6 518 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 GOLGA6CA6NDK9 693 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 GOLGA6DP0CG33 693 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 CFAP57Q96MR6 1250 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 RBM28Q9NW13 759 aaKnown RBP21.08■□□□□ 0.97
SHANK3-203ENST00000445220 GOLGA6AQ9NYA3 693 aa21.08■□□□□ 0.97
SHANK3-203ENST00000445220 ZNF75DP51815 510 aa21.08■□□□□ 0.96
SHANK3-203ENST00000445220 RAB11FIP4Q86YS3 637 aa21.08■□□□□ 0.96
SHANK3-203ENST00000445220 TRAPPC8Q9Y2L5 1435 aa21.07■□□□□ 0.96
SHANK3-203ENST00000445220 Q6ZUG5 572 aa21.07■□□□□ 0.96
SHANK3-203ENST00000445220 AKR1B15C9JRZ8 316 aaPredicted RBP21.07■□□□□ 0.96
SHANK3-203ENST00000445220 ATL3Q6DD88 541 aa21.07■□□□□ 0.96
SHANK3-203ENST00000445220 ZNF444Q8N0Y2 327 aaPredicted RBP21.07■□□□□ 0.96
SHANK3-203ENST00000445220 MEIS3Q99687 375 aa21.07■□□□□ 0.96
SHANK3-203ENST00000445220 ZFYP08048 801 aaPredicted RBP21.07■□□□□ 0.96
SHANK3-203ENST00000445220 NBPF7P0C2Y1 421 aaPredicted RBP21.07■□□□□ 0.96
SHANK3-203ENST00000445220 ATP11AP98196 1134 aa21.07■□□□□ 0.96
SHANK3-203ENST00000445220 UQCRFS1P1P0C7P4 283 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 PPP1R9BQ96SB3 815 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 NAPGQ99747 312 aaPredicted RBP21.06■□□□□ 0.96
SHANK3-203ENST00000445220 STAT6P42226 847 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 STXBP4Q6ZWJ1 553 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 MYCBPQ99417 103 aaPredicted RBP21.06■□□□□ 0.96
SHANK3-203ENST00000445220 LUC7L2Q9Y383 392 aaKnown RBP21.06■□□□□ 0.96
SHANK3-203ENST00000445220 ACTN2P35609 894 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 ANKIB1Q9P2G1 1089 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 FERP16591 822 aa21.06■□□□□ 0.96
SHANK3-203ENST00000445220 TLDC2A0PJX2 215 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 LDHCP07864 332 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 ATP8B2P98198 1209 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 LRRC2Q9BYS8 371 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 POLKQ9UBT6 870 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 BUB1BO60566 1050 aaPredicted RBP21.05■□□□□ 0.96
SHANK3-203ENST00000445220 PCK1P35558 622 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 NAP1L3Q99457 506 aaPredicted RBP21.05■□□□□ 0.96
SHANK3-203ENST00000445220 TRIM7Q9C029 511 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 FLT4P35916 1363 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 DCTPP1Q9H773 170 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 IMPACTQ9P2X3 320 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 ZBTB43O43298 467 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 KRT13P13646 458 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 GRIPAP1Q4V328 841 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 TBC1D5Q92609 795 aa21.05■□□□□ 0.96
SHANK3-203ENST00000445220 FAM160A1Q05DH4 1040 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 CCDC122Q5T0U0 273 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 C16orf71Q8IYS4 520 aaPredicted RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 FEZ2Q9UHY8 353 aaPredicted RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 DMTNQ08495 405 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 CRACR2BQ8N4Y2 399 aaPredicted RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 TSGA10Q9BZW7 698 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 MTRF1LQ9UGC7 380 aaKnown RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 UBXN1Q04323 297 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 EIF4A2Q14240 407 aaKnown RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 MFSD6Q6ZSS7 791 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 MMRN2Q9H8L6 949 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 TTF2Q9UNY4 1162 aaKnown RBP21.04■□□□□ 0.96
SHANK3-203ENST00000445220 SWAP70Q9UH65 585 aa21.04■□□□□ 0.96
SHANK3-203ENST00000445220 SREK1Q8WXA9 508 aaKnown RBP21.03■□□□□ 0.96
SHANK3-203ENST00000445220 ATP5J2-PTCD1G3V325 749 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 GPTP24298 496 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 UTP14CQ5TAP6 766 aaKnown RBP21.03■□□□□ 0.96
SHANK3-203ENST00000445220 BRAPQ7Z569 592 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 NPATQ14207 1427 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 ATP2A1O14983 1001 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 INTS8Q75QN2 995 aaKnown RBP21.03■□□□□ 0.96
SHANK3-203ENST00000445220 FMNL3Q8IVF7 1028 aa21.03■□□□□ 0.96
SHANK3-203ENST00000445220 PLEKHM2Q8IWE5 1019 aa21.02■□□□□ 0.96
SHANK3-203ENST00000445220 CACNA2D3Q8IZS8 1091 aa21.02■□□□□ 0.96
SHANK3-203ENST00000445220 DHX58Q96C10 678 aa21.02■□□□□ 0.96
SHANK3-203ENST00000445220 CHPF2Q9P2E5 772 aa21.02■□□□□ 0.96
SHANK3-203ENST00000445220 MPHOSPH10O00566 681 aaKnown RBP21.02■□□□□ 0.96
SHANK3-203ENST00000445220 TSNARE1Q96NA8 513 aa21.02■□□□□ 0.96
SHANK3-203ENST00000445220 LMBRD1Q9NUN5 540 aa21.02■□□□□ 0.96
SHANK3-203ENST00000445220 RLBP1P12271 317 aa21.02■□□□□ 0.95
SHANK3-203ENST00000445220 STMN2Q93045 179 aa21.02■□□□□ 0.95
SHANK3-203ENST00000445220 CLSTN2Q9H4D0 955 aa21.02■□□□□ 0.95
SHANK3-203ENST00000445220 GIGYF1O75420 1035 aaPredicted RBP21.01■□□□□ 0.95
SHANK3-203ENST00000445220 ATP6V1AP38606 617 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 C8orf58Q8NAV2 365 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 CBX8Q9HC52 389 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 ALDH3A1P30838 453 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 NBPF14Q5TI25 921 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 RPGRQ92834 1020 aaKnown RBP21.01■□□□□ 0.95
SHANK3-203ENST00000445220 LRRC59Q96AG4 307 aaKnown RBP21.01■□□□□ 0.95
SHANK3-203ENST00000445220 DNAI2Q9GZS0 605 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 SMIM23A6NLE4 172 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 ZBTB40Q9NUA8 1239 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 NPC1L1Q9UHC9 1359 aa21.01■□□□□ 0.95
SHANK3-203ENST00000445220 HPDP32754 393 aaPredicted RBP21.01■□□□□ 0.95
SHANK3-203ENST00000445220 MIPOL1Q8TD10 442 aa21■□□□□ 0.95
SHANK3-203ENST00000445220 GRM8O00222 908 aa21■□□□□ 0.95
SHANK3-203ENST00000445220 VIMP08670 466 aaKnown RBP21■□□□□ 0.95
SHANK3-203ENST00000445220 STX17P56962 302 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms