RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
LINC00642-203ENST00000444942 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
LINC00642-203ENST00000444942 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 EVI5O60447 810 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 FLIIQ13045 1269 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 PARP10Q53GL7 1025 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 OTUD7BQ6GQQ9 843 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 MYOZ2Q9NPC6 264 aa11.75□□□□□ -0.53
LINC00642-203ENST00000444942 SSC5DA1L4H1 1573 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 F6X3S4 739 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
LINC00642-203ENST00000444942 GJA8P48165 433 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 BCAMP50895 628 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 MTFR1Q15390 333 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 DOK7Q18PE1 504 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
LINC00642-203ENST00000444942 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
LINC00642-203ENST00000444942 GRAPQ13588 217 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 PRKG1Q13976 671 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
LINC00642-203ENST00000444942 KSR2Q6VAB6 950 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 TMC4Q7Z404 712 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 TRMT2AQ8IZ69 625 aaKnown RBP11.73□□□□□ -0.53
LINC00642-203ENST00000444942 GRAPLQ8TC17 118 aaPredicted RBP11.73□□□□□ -0.53
LINC00642-203ENST00000444942 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 WNK4Q96J92 1243 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 GUCD1Q96NT3 240 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
LINC00642-203ENST00000444942 NCOR1O75376 2440 aa11.73□□□□□ -0.53
LINC00642-203ENST00000444942 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
LINC00642-203ENST00000444942 GJB1P08034 283 aa11.72□□□□□ -0.53
LINC00642-203ENST00000444942 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
LINC00642-203ENST00000444942 SLC4A10Q6U841 1118 aa11.72□□□□□ -0.53
LINC00642-203ENST00000444942 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
LINC00642-203ENST00000444942 ANGEL1Q9UNK9 670 aaKnown RBP11.72□□□□□ -0.53
LINC00642-203ENST00000444942 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
LINC00642-203ENST00000444942 SPEF2Q9C093 1822 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 FARP2O94887 1054 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-203ENST00000444942 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 IRX6P78412 446 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-203ENST00000444942 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.53
LINC00642-203ENST00000444942 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
LINC00642-203ENST00000444942 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 GMLQ99445 158 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 PTPN18Q99952 460 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 CWC25Q9NXE8 425 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-203ENST00000444942 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
LINC00642-203ENST00000444942 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
LINC00642-203ENST00000444942 MYH3P11055 1940 aa11.71□□□□□ -0.54
LINC00642-203ENST00000444942 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
LINC00642-203ENST00000444942 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
LINC00642-203ENST00000444942 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
LINC00642-203ENST00000444942 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
LINC00642-203ENST00000444942 EYA3Q99504 573 aa11.7□□□□□ -0.54
LINC00642-203ENST00000444942 BDP1A6H8Y1 2624 aa11.7□□□□□ -0.54
LINC00642-203ENST00000444942 CACNA1AO00555 2505 aa11.7□□□□□ -0.54
LINC00642-203ENST00000444942 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 IRS4O14654 1257 aaPredicted RBP11.69□□□□□ -0.54
LINC00642-203ENST00000444942 PRMT2P55345 433 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 MAP3K11Q16584 847 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 FAM109BQ6ICB4 259 aaPredicted RBP11.69□□□□□ -0.54
LINC00642-203ENST00000444942 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 FZD1Q9UP38 647 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 IRS2Q9Y4H2 1338 aa11.69□□□□□ -0.54
LINC00642-203ENST00000444942 NEURL1BA8MQ27 555 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 GNRH1P01148 92 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 CCL5P13501 91 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 CCDC191Q8NCU4 936 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 SNX27Q96L92 541 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
LINC00642-203ENST00000444942 UNCXA6NJT0 531 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
LINC00642-203ENST00000444942 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
LINC00642-203ENST00000444942 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
LINC00642-203ENST00000444942 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 WNT10BO00744 389 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
LINC00642-203ENST00000444942 GJA5P36382 358 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 GPSM2P81274 684 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 ALDH1L2Q3SY69 923 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 UBE3BQ7Z3V4 1068 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 TBC1D16Q8TBP0 767 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
LINC00642-203ENST00000444942 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
LINC00642-203ENST00000444942 NOB1Q9ULX3 412 aaKnown RBP11.67□□□□□ -0.54
LINC00642-203ENST00000444942 ECM29Q5VYK3 1845 aa11.66□□□□□ -0.54
LINC00642-203ENST00000444942 COL4A1P02462 1669 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms