RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ITPRIPQ8IWB1 547 aa23.17■■□□□ 1.3
CCDC188-202ENST00000444532 CERS5Q8N5B7 392 aa23.17■■□□□ 1.3
CCDC188-202ENST00000444532 LPIN2Q92539 896 aa23.17■■□□□ 1.3
CCDC188-202ENST00000444532 GGA3Q9NZ52 723 aa23.17■■□□□ 1.3
CCDC188-202ENST00000444532 PA2G4Q9UQ80 394 aaKnown RBP23.17■■□□□ 1.3
CCDC188-202ENST00000444532 CNTNAP1P78357 1384 aa23.16■■□□□ 1.3
CCDC188-202ENST00000444532 PITPNM2Q9BZ72 1349 aa23.16■■□□□ 1.3
CCDC188-202ENST00000444532 SULF1Q8IWU6 871 aa23.16■■□□□ 1.3
CCDC188-202ENST00000444532 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
CCDC188-202ENST00000444532 RCAN3Q9UKA8 241 aa23.16■■□□□ 1.3
CCDC188-202ENST00000444532 ZBTB7BO15156 539 aaPredicted RBP23.15■■□□□ 1.3
CCDC188-202ENST00000444532 CELF2O95319 508 aaKnown RBP23.15■■□□□ 1.3
CCDC188-202ENST00000444532 DEFB115Q30KQ5 88 aa23.15■■□□□ 1.3
CCDC188-202ENST00000444532 ANGEL2Q5VTE6 544 aaKnown RBP23.15■■□□□ 1.3
CCDC188-202ENST00000444532 ABT1Q9ULW3 272 aaKnown RBP23.15■■□□□ 1.3
CCDC188-202ENST00000444532 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
CCDC188-202ENST00000444532 RASSF10A6NK89 507 aa23.14■■□□□ 1.29
CCDC188-202ENST00000444532 WNT10BO00744 389 aa23.14■■□□□ 1.29
CCDC188-202ENST00000444532 NBPF9Q3BBW0 867 aa23.14■■□□□ 1.29
CCDC188-202ENST00000444532 FRAT2O75474 233 aaPredicted RBP23.13■■□□□ 1.29
CCDC188-202ENST00000444532 BCAMP50895 628 aa23.13■■□□□ 1.29
CCDC188-202ENST00000444532 ATP2B3Q16720 1220 aa23.13■■□□□ 1.29
CCDC188-202ENST00000444532 MFSD14BQ5SR56 506 aa23.13■■□□□ 1.29
CCDC188-202ENST00000444532 JAG2Q9Y219 1238 aa23.13■■□□□ 1.29
CCDC188-202ENST00000444532 ADM5C9JUS6 153 aa23.12■■□□□ 1.29
CCDC188-202ENST00000444532 MTMR14Q8NCE2 650 aa23.12■■□□□ 1.29
CCDC188-202ENST00000444532 ZBED3Q96IU2 234 aaPredicted RBP23.12■■□□□ 1.29
CCDC188-202ENST00000444532 ZNF408Q9H9D4 720 aa23.12■■□□□ 1.29
CCDC188-202ENST00000444532 TLL2Q9Y6L7 1015 aa23.12■■□□□ 1.29
CCDC188-202ENST00000444532 PNMA6EA0A0J9YXQ4 647 aa23.11■■□□□ 1.29
CCDC188-202ENST00000444532 DLGAP5Q15398 846 aa23.11■■□□□ 1.29
CCDC188-202ENST00000444532 PANK1Q8TE04 598 aa23.11■■□□□ 1.29
CCDC188-202ENST00000444532 TBC1D22AQ8WUA7 517 aa23.11■■□□□ 1.29
CCDC188-202ENST00000444532 IQSEC3Q9UPP2 1182 aaPredicted RBP23.11■■□□□ 1.29
CCDC188-202ENST00000444532 ARAP2Q8WZ64 1704 aa23.11■■□□□ 1.29
CCDC188-202ENST00000444532 F8W031 263 aaPredicted RBP23.1■■□□□ 1.29
CCDC188-202ENST00000444532 ATP8B2P98198 1209 aa23.1■■□□□ 1.29
CCDC188-202ENST00000444532 DLK2Q6UY11 383 aa23.1■■□□□ 1.29
CCDC188-202ENST00000444532 AKAP2Q9Y2D5 859 aa23.1■■□□□ 1.29
CCDC188-202ENST00000444532 VEGFBP49765 207 aa23.09■■□□□ 1.29
CCDC188-202ENST00000444532 POLA2Q14181 598 aa23.09■■□□□ 1.29
CCDC188-202ENST00000444532 SAPCD2Q86UD0 394 aa23.09■■□□□ 1.29
CCDC188-202ENST00000444532 HHIPL1Q96JK4 782 aa23.09■■□□□ 1.29
CCDC188-202ENST00000444532 MYH13Q9UKX3 1938 aa23.08■■□□□ 1.29
CCDC188-202ENST00000444532 CHAF1AQ13111 956 aaPredicted RBP23.08■■□□□ 1.29
CCDC188-202ENST00000444532 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
CCDC188-202ENST00000444532 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
CCDC188-202ENST00000444532 GNL3LQ9NVN8 582 aaKnown RBP23.08■■□□□ 1.29
CCDC188-202ENST00000444532 ECM29Q5VYK3 1845 aa23.08■■□□□ 1.28
CCDC188-202ENST00000444532 TFCP2Q12800 502 aa23.07■■□□□ 1.28
CCDC188-202ENST00000444532 CFAP100Q494V2 611 aa23.07■■□□□ 1.28
CCDC188-202ENST00000444532 APOBEC3FQ8IUX4 373 aaKnown RBP23.07■■□□□ 1.28
CCDC188-202ENST00000444532 C2orf69Q8N8R5 385 aa23.07■■□□□ 1.28
CCDC188-202ENST00000444532 CDCA5Q96FF9 252 aa23.07■■□□□ 1.28
CCDC188-202ENST00000444532 SERPINA10Q9UK55 444 aa23.07■■□□□ 1.28
CCDC188-202ENST00000444532 TTF2Q9UNY4 1162 aaKnown RBP23.07■■□□□ 1.28
CCDC188-202ENST00000444532 MYO1BO43795 1136 aa23.06■■□□□ 1.28
CCDC188-202ENST00000444532 ECE1P42892 770 aa23.06■■□□□ 1.28
CCDC188-202ENST00000444532 C1orf115Q9H7X2 142 aa23.06■■□□□ 1.28
CCDC188-202ENST00000444532 GBA2Q9HCG7 927 aaPredicted RBP23.06■■□□□ 1.28
CCDC188-202ENST00000444532 SUGT1Q9Y2Z0 365 aa23.06■■□□□ 1.28
CCDC188-202ENST00000444532 WDR33Q9C0J8 1336 aaKnown RBP23.06■■□□□ 1.28
CCDC188-202ENST00000444532 SPDYE2BA6NHP3 402 aa23.05■■□□□ 1.28
CCDC188-202ENST00000444532 ZBTB22O15209 634 aa23.05■■□□□ 1.28
CCDC188-202ENST00000444532 SPDYE6P0CI01 402 aa23.05■■□□□ 1.28
CCDC188-202ENST00000444532 RBM5P52756 815 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCDC188-202ENST00000444532 TIMM10P62072 90 aa23.05■■□□□ 1.28
CCDC188-202ENST00000444532 MVPQ14764 893 aaKnown RBP23.05■■□□□ 1.28
CCDC188-202ENST00000444532 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.05■■□□□ 1.28
CCDC188-202ENST00000444532 WDR66Q8TBY9 1149 aa23.05■■□□□ 1.28
CCDC188-202ENST00000444532 A0A1B0GUL7 405 aa23.04■■□□□ 1.28
CCDC188-202ENST00000444532 SEMA3EO15041 775 aa23.04■■□□□ 1.28
CCDC188-202ENST00000444532 HDLBPQ00341 1268 aaKnown RBP23.04■■□□□ 1.28
CCDC188-202ENST00000444532 CAPNS2Q96L46 248 aa23.04■■□□□ 1.28
CCDC188-202ENST00000444532 PRMT6Q96LA8 375 aaPredicted RBP23.04■■□□□ 1.28
CCDC188-202ENST00000444532 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
CCDC188-202ENST00000444532 DDX19BQ9UMR2 479 aa23.04■■□□□ 1.28
CCDC188-202ENST00000444532 PAXIP1Q6ZW49 1069 aaPredicted RBP23.03■■□□□ 1.28
CCDC188-202ENST00000444532 MRIQ9BWK5 157 aa23.03■■□□□ 1.28
CCDC188-202ENST00000444532 SCAF8Q9UPN6 1271 aaKnown RBP23.03■■□□□ 1.28
CCDC188-202ENST00000444532 PCDHAC2Q9Y5I4 1007 aa23.03■■□□□ 1.28
CCDC188-202ENST00000444532 ADORA1P30542 326 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 PHKA1P46020 1223 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 HUNKP57058 714 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 PDE3AQ14432 1141 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 GRIK5Q16478 980 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 CCDC102BQ68D86 513 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 CYP4F22Q6NT55 531 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 XAGE2Q96GT9 111 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 DENND2AQ9ULE3 1009 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 COG6Q9Y2V7 657 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 MAST3O60307 1309 aa23.02■■□□□ 1.28
CCDC188-202ENST00000444532 COL1A1P02452 1464 aaPredicted RBP23.01■■□□□ 1.27
CCDC188-202ENST00000444532 SURF6O75683 361 aaKnown RBP23.01■■□□□ 1.27
CCDC188-202ENST00000444532 CRKP46108 304 aa23.01■■□□□ 1.27
CCDC188-202ENST00000444532 FKBP1BP68106 108 aa23.01■■□□□ 1.27
CCDC188-202ENST00000444532 CEP85Q6P2H3 762 aa23.01■■□□□ 1.27
CCDC188-202ENST00000444532 NEUROD6Q96NK8 337 aa23.01■■□□□ 1.27
CCDC188-202ENST00000444532 NOP58Q9Y2X3 529 aaKnown RBP23.01■■□□□ 1.27
CCDC188-202ENST00000444532 NF2P35240 595 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms