RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SSH1Q8WYL5 1049 aa26.51■■□□□ 1.83
VSX1-206ENST00000444511 CSRNP1Q96S65 589 aa26.51■■□□□ 1.83
VSX1-206ENST00000444511 BICC1Q9H694 974 aaKnown RBP26.51■■□□□ 1.83
VSX1-206ENST00000444511 F8W031 263 aaPredicted RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 TRPA1O75762 1119 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 FKBP1AP62942 108 aaKnown RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 UBE4AQ14139 1066 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 REM2Q8IYK8 340 aaPredicted RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 PUS3Q9BZE2 481 aaKnown RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 RNF186Q9NXI6 227 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 JAG2Q9Y219 1238 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 RABL6Q3YEC7 729 aaPredicted RBP26.48■■□□□ 1.83
VSX1-206ENST00000444511 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
VSX1-206ENST00000444511 MROH5Q6ZUA9 1318 aa26.47■■□□□ 1.83
VSX1-206ENST00000444511 MCOLN1Q9GZU1 580 aa26.47■■□□□ 1.83
VSX1-206ENST00000444511 CCDC85CA6NKD9 419 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 MYO1BO43795 1136 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 HIBADHP31937 336 aaKnown RBP26.46■■□□□ 1.83
VSX1-206ENST00000444511 GYG1P46976 350 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 DGKZQ13574 1117 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 PRKG1Q13976 671 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 CFAP100Q494V2 611 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 ARMC9Q7Z3E5 817 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 CDCA7LQ96GN5 454 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 DEFB129Q9H1M3 183 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 RIPOR2Q9Y4F9 1068 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 FAM205AQ6ZU69 1335 aa26.45■■□□□ 1.83
VSX1-206ENST00000444511 COL1A1P02452 1464 aaPredicted RBP26.45■■□□□ 1.82
VSX1-206ENST00000444511 ALDH1L2Q3SY69 923 aa26.45■■□□□ 1.82
VSX1-206ENST00000444511 ANKRD44Q8N8A2 993 aa26.45■■□□□ 1.82
VSX1-206ENST00000444511 TDRD7Q8NHU6 1098 aaKnown RBP26.45■■□□□ 1.82
VSX1-206ENST00000444511 SPDYE2BA6NHP3 402 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 SPDYE6P0CI01 402 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 RBM5P52756 815 aaKnown RBP eCLIP26.44■■□□□ 1.82
VSX1-206ENST00000444511 FAM84BQ96KN1 310 aaPredicted RBP26.44■■□□□ 1.82
VSX1-206ENST00000444511 SMC4Q9NTJ3 1288 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 PCDHAC2Q9Y5I4 1007 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 CASP8AP2Q9UKL3 1982 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 CLRN2A0PK11 232 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 METTL24Q5JXM2 366 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 MFSD14BQ5SR56 506 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 USP44Q9H0E7 712 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 PPP2R3BQ9Y5P8 575 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 LRRC24Q50LG9 513 aa26.42■■□□□ 1.82
VSX1-206ENST00000444511 VPS37DQ86XT2 251 aa26.42■■□□□ 1.82
VSX1-206ENST00000444511 PRMT6Q96LA8 375 aaPredicted RBP26.42■■□□□ 1.82
VSX1-206ENST00000444511 VEZTQ9HBM0 779 aa26.42■■□□□ 1.82
VSX1-206ENST00000444511 ANGEL1Q9UNK9 670 aaKnown RBP26.42■■□□□ 1.82
VSX1-206ENST00000444511 PTPN12Q05209 780 aaKnown RBP26.41■■□□□ 1.82
VSX1-206ENST00000444511 MKRN3Q13064 507 aaKnown RBP26.4■■□□□ 1.82
VSX1-206ENST00000444511 TTF2Q9UNY4 1162 aaKnown RBP26.4■■□□□ 1.82
VSX1-206ENST00000444511 CAVIN4Q5BKX8 364 aa26.39■■□□□ 1.82
VSX1-206ENST00000444511 KLHDC4Q8TBB5 520 aa26.39■■□□□ 1.82
VSX1-206ENST00000444511 AKAP11Q9UKA4 1901 aa26.39■■□□□ 1.81
VSX1-206ENST00000444511 PPP1R12BO60237 982 aaPredicted RBP26.38■■□□□ 1.81
VSX1-206ENST00000444511 PDE8BO95263 885 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 LDLRAD1Q5T700 205 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 TRMT2AQ8IZ69 625 aaKnown RBP26.38■■□□□ 1.81
VSX1-206ENST00000444511 SERPINA10Q9UK55 444 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 FZD1Q9UP38 647 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 FRAT2O75474 233 aaPredicted RBP26.37■■□□□ 1.81
VSX1-206ENST00000444511 SUPT20HL1Q3ZLR7 823 aa26.37■■□□□ 1.81
VSX1-206ENST00000444511 FBXO33Q7Z6M2 555 aa26.37■■□□□ 1.81
VSX1-206ENST00000444511 IQSEC3Q9UPP2 1182 aaPredicted RBP26.37■■□□□ 1.81
VSX1-206ENST00000444511 AOX1Q06278 1338 aa26.37■■□□□ 1.81
VSX1-206ENST00000444511 CCER2I3L3R5 266 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 CT47B1P0C2W7 299 aaPredicted RBP26.36■■□□□ 1.81
VSX1-206ENST00000444511 TM4SF4P48230 202 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 SREBF2Q12772 1141 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 CHAF1AQ13111 956 aaPredicted RBP26.36■■□□□ 1.81
VSX1-206ENST00000444511 VGLL2Q8N8G2 317 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 RASA3Q14644 834 aa26.35■■□□□ 1.81
VSX1-206ENST00000444511 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.35■■□□□ 1.81
VSX1-206ENST00000444511 SSC5DA1L4H1 1573 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 TNFAIP1Q13829 316 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 MAP3K11Q16584 847 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 NBPF12Q5TAG4 269 aaPredicted RBP26.34■■□□□ 1.81
VSX1-206ENST00000444511 SPRYD7Q5W111 196 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 SLC10A4Q96EP9 437 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 ECM29Q5VYK3 1845 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 TBC1D8O95759 1140 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 IFIT1P09914 478 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 UBTFL1P0CB47 393 aaPredicted RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 CRKP46108 304 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 PUM3Q15397 648 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 SPDYE2Q495Y8 402 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 TBC1D22AQ8WUA7 517 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 TDRD3Q9H7E2 651 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 ZNF70Q9UC06 446 aaPredicted RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 EYA2O00167 538 aa26.32■■□□□ 1.8
VSX1-206ENST00000444511 BCAMP50895 628 aa26.32■■□□□ 1.8
VSX1-206ENST00000444511 DZIP1LQ8IYY4 767 aaKnown RBP26.32■■□□□ 1.8
VSX1-206ENST00000444511 IREB2P48200 963 aaKnown RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 RFX5P48382 616 aaPredicted RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 CTU1Q7Z7A3 348 aaKnown RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 API5Q9BZZ5 524 aaKnown RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 UNCXA6NJT0 531 aa26.3■■□□□ 1.8
VSX1-206ENST00000444511 GRIK5Q16478 980 aa26.3■■□□□ 1.8
VSX1-206ENST00000444511 CLMNQ96JQ2 1002 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms