RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
AP001062.3-202ENST00000444409 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
AP001062.3-202ENST00000444409 FAM205AQ6ZU69 1335 aa17.1■□□□□ 0.33
AP001062.3-202ENST00000444409 EYA2O00167 538 aa17.09■□□□□ 0.33
AP001062.3-202ENST00000444409 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
AP001062.3-202ENST00000444409 CDCA5Q96FF9 252 aa17.09■□□□□ 0.33
AP001062.3-202ENST00000444409 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
AP001062.3-202ENST00000444409 HUNKP57058 714 aa17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 MAP2K1Q02750 393 aaPredicted RBP17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 FBXO33Q7Z6M2 555 aa17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 FRAT1Q92837 279 aaPredicted RBP17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 JAG2Q9Y219 1238 aa17.08■□□□□ 0.32
AP001062.3-202ENST00000444409 FOXN1O15353 648 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 GNAI3P08754 354 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 FGFR2P21802 821 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 GRM1Q13255 1194 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 PUM3Q15397 648 aaKnown RBP17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 COL13A1Q5TAT6 717 aaPredicted RBP17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 ATG9AQ7Z3C6 839 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 MTMR14Q8NCE2 650 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
AP001062.3-202ENST00000444409 CIAO1O76071 339 aa17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 MAP2K2P36507 400 aa17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 AIDAQ96BJ3 306 aa17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
AP001062.3-202ENST00000444409 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
AP001062.3-202ENST00000444409 AOC2O75106 756 aa17.05■□□□□ 0.32
AP001062.3-202ENST00000444409 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
AP001062.3-202ENST00000444409 DLGAP5Q15398 846 aa17.05■□□□□ 0.32
AP001062.3-202ENST00000444409 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
AP001062.3-202ENST00000444409 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
AP001062.3-202ENST00000444409 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 BCAMP50895 628 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 FKBP1BP68106 108 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 MTX1Q13505 466 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 RGMBQ6NW40 437 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 LPIN2Q92539 896 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 SIL1Q9H173 461 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
AP001062.3-202ENST00000444409 PAPPA2Q9BXP8 1791 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 SPDYE2BA6NHP3 402 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 SPDYE6P0CI01 402 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 NOGQ13253 232 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 PRAMEF18Q5VWM3 479 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 PCDHAC2Q9Y5I4 1007 aa17.03■□□□□ 0.32
AP001062.3-202ENST00000444409 COL1A1P02452 1464 aaPredicted RBP17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 FAM155AB1AL88 458 aaPredicted RBP17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 SLC5A1P13866 664 aa17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 PRMT6Q96LA8 375 aaPredicted RBP17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 CEP126Q9P2H0 1117 aa17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 SERPINA10Q9UK55 444 aa17.02■□□□□ 0.32
AP001062.3-202ENST00000444409 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 SRGAP3O43295 1099 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 MYO1BO43795 1136 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 GNAI2P04899 355 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 PRDM10Q9NQV6 1147 aa17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
AP001062.3-202ENST00000444409 NF2P35240 595 aa17■□□□□ 0.31
AP001062.3-202ENST00000444409 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
AP001062.3-202ENST00000444409 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
AP001062.3-202ENST00000444409 ATP2B3Q16720 1220 aa17■□□□□ 0.31
AP001062.3-202ENST00000444409 ZIC5Q96T25 663 aa17■□□□□ 0.31
AP001062.3-202ENST00000444409 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
AP001062.3-202ENST00000444409 DEFB129Q9H1M3 183 aa17■□□□□ 0.31
AP001062.3-202ENST00000444409 AOX1Q06278 1338 aa16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 SLC10A3P09131 477 aa16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 LBX1P52954 281 aa16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 GRIK5Q16478 980 aa16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 MOB2Q70IA6 237 aa16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
AP001062.3-202ENST00000444409 CLRN2A0PK11 232 aa16.98■□□□□ 0.31
AP001062.3-202ENST00000444409 CRKP46108 304 aa16.98■□□□□ 0.31
AP001062.3-202ENST00000444409 HDLBPQ00341 1268 aaKnown RBP16.98■□□□□ 0.31
AP001062.3-202ENST00000444409 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
AP001062.3-202ENST00000444409 CA12O43570 354 aa16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 RASAL3Q86YV0 1011 aa16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 DZIP1LQ8IYY4 767 aaKnown RBP16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
AP001062.3-202ENST00000444409 PNMA6EA0A0J9YXQ4 647 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms